RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 CMA1P23946 247 aa14.33□□□□□ -0.12
ZNF548-201ENST00000336128 NDUFA8P51970 172 aa14.33□□□□□ -0.12
ZNF548-201ENST00000336128 ZFPM1Q8IX07 1006 aa14.33□□□□□ -0.12
ZNF548-201ENST00000336128 BRMS1Q9HCU9 246 aa14.33□□□□□ -0.12
ZNF548-201ENST00000336128 MRVI1Q9Y6F6 885 aa14.33□□□□□ -0.12
ZNF548-201ENST00000336128 IGKV6D-41A0A0C4DH26 115 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 ZBTB7AO95365 584 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 SHMT1P34896 483 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 CACNB3P54284 484 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 NPY5RQ15761 445 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 SLC35G1Q2M3R5 365 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 CCDC125Q86Z20 511 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 LZTS2Q9BRK4 669 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 EHD4Q9H223 541 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 COL4A5P29400 1685 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 FAM205CA6NFA0 338 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 RASGRP2Q7LDG7 609 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 TNFRSF25Q93038 417 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 CABP5Q9NP86 173 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.32□□□□□ -0.12
ZNF548-201ENST00000336128 FAM198AQ9UFP1 575 aa14.32□□□□□ -0.12
ZNF548-201ENST00000336128 CUTAO60888 179 aa14.31□□□□□ -0.12
ZNF548-201ENST00000336128 PARP1P09874 1014 aaKnown RBP14.31□□□□□ -0.12
ZNF548-201ENST00000336128 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
ZNF548-201ENST00000336128 PFKFB1P16118 471 aa14.31□□□□□ -0.12
ZNF548-201ENST00000336128 NLRP5P59047 1200 aa14.31□□□□□ -0.12
ZNF548-201ENST00000336128 CFAP100Q494V2 611 aa14.31□□□□□ -0.12
ZNF548-201ENST00000336128 SASS6Q6UVJ0 657 aa14.31□□□□□ -0.12
ZNF548-201ENST00000336128 ZNF277Q9NRM2 450 aaPredicted RBP14.31□□□□□ -0.12
ZNF548-201ENST00000336128 MTMR4Q9NYA4 1195 aa14.31□□□□□ -0.12
ZNF548-201ENST00000336128 PCDHB6Q9Y5E3 794 aa14.31□□□□□ -0.12
ZNF548-201ENST00000336128 GOLGA8HP0CJ92 632 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 TCP10Q12799 353 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 EARS2Q5JPH6 523 aaKnown RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 SHC4Q6S5L8 630 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 GREB1LQ9C091 1923 aaPredicted RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 KLRF2D3W0D1 207 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 CYTH3O43739 400 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 ATP2B1P20020 1258 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 RSBN1LQ6PCB5 846 aaPredicted RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 KRI1Q8N9T8 703 aaKnown RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 GPKOWQ92917 476 aaPredicted RBP eCLIP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 PDLIM2Q96JY6 352 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 CLIC6Q96NY7 704 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 SPZ1Q9BXG8 430 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 SH3GLB2Q9NR46 395 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 NOL7Q9UMY1 257 aaKnown RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 CEP131Q9UPN4 1083 aa14.3□□□□□ -0.12
ZNF548-201ENST00000336128 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
ZNF548-201ENST00000336128 DDTLA6NHG4 134 aaPredicted RBP14.29□□□□□ -0.12
ZNF548-201ENST00000336128 TGFB2P61812 414 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 ANO6Q4KMQ2 910 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 SOGA3Q5TF21 947 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 RESP18Q5W5W9 173 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 USP17L2Q6R6M4 530 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 CLEC10AQ8IUN9 316 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
ZNF548-201ENST00000336128 DNAJC18Q9H819 358 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 FBXO2Q9UK22 296 aaPredicted RBP14.29□□□□□ -0.12
ZNF548-201ENST00000336128 FAM237AA0A1B0GTK4 181 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 TRIM75PA6NK02 468 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 USP17L5A8MUK1 530 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 RAD17O75943 681 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 SLURP2P0DP57 97 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 CALML3P27482 149 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 POLD1P28340 1107 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 NOM1Q5C9Z4 860 aaKnown RBP14.29□□□□□ -0.12
ZNF548-201ENST00000336128 WWC2Q6AWC2 1192 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 SH3BP5LQ7L8J4 393 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 LRRC47Q8N1G4 583 aaKnown RBP14.29□□□□□ -0.12
ZNF548-201ENST00000336128 FAM200AQ8TCP9 573 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 VPS33BQ9H267 617 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 PIM2Q9P1W9 311 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 HPSEQ9Y251 543 aa14.29□□□□□ -0.12
ZNF548-201ENST00000336128 PSMD14O00487 310 aa14.28□□□□□ -0.12
ZNF548-201ENST00000336128 ZNF202O95125 648 aa14.28□□□□□ -0.12
ZNF548-201ENST00000336128 PTPREP23469 700 aa14.28□□□□□ -0.12
ZNF548-201ENST00000336128 EIF6P56537 245 aaKnown RBP14.28□□□□□ -0.12
ZNF548-201ENST00000336128 ZSCAN29Q8IWY8 852 aaPredicted RBP14.28□□□□□ -0.12
ZNF548-201ENST00000336128 MTFR1LQ9H019 292 aa14.28□□□□□ -0.12
ZNF548-201ENST00000336128 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
ZNF548-201ENST00000336128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.27□□□□□ -0.12
ZNF548-201ENST00000336128 STXBP3O00186 592 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.12
ZNF548-201ENST00000336128 ADAMTS3O15072 1205 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 TTLL1O95922 423 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 VIL1P09327 827 aaKnown RBP14.27□□□□□ -0.12
ZNF548-201ENST00000336128 PDHBP11177 359 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 SMARCA1P28370 1054 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 SYKP43405 635 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 HEATR3Q7Z4Q2 680 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 BLIDQ8IZY5 108 aa14.27□□□□□ -0.12
ZNF548-201ENST00000336128 TRIM44Q96DX7 344 aaPredicted RBP14.27□□□□□ -0.12
ZNF548-201ENST00000336128 PRMT6Q96LA8 375 aaPredicted RBP14.27□□□□□ -0.12
ZNF548-201ENST00000336128 CCDC17Q96LX7 622 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms