RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 BIRC2Q13490 618 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 GLT8D2Q9H1C3 349 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 ZBBXA8MT70 800 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 GUCY2CP25092 1073 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 PPP2R5DQ14738 602 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 TEKT1Q969V4 418 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 IRAK4Q9NWZ3 460 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 GOLGA8CPA6NN73 597 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 TRPA1O75762 1119 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 YWHAEP62258 255 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 GJC2Q5T442 439 aaPredicted RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 GARSP41250 739 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 RANBP1P43487 201 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 MRPL28Q13084 256 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 PPP1R42Q7Z4L9 355 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 GDAP1L1Q96MZ0 367 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 MYD88Q99836 296 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 SNAPC4Q5SXM2 1469 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 CHGBP05060 677 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 KRT8P05787 483 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 HARSP12081 509 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 CDAN1Q8IWY9 1227 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 FGD4Q96M96 766 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 CBX8Q9HC52 389 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 ASPHQ12797 758 aa6.78□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM56Q9BRZ2 755 aaKnown RBP6.78□□□□□ -1.32
CSMD1-201ENST00000335551 EXOC5O00471 708 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 E2F5Q15329 346 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ALS2CLQ60I27 953 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 MAP3K1Q13233 1512 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 KRT9P35527 623 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 RCN2Q14257 317 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 FNBP1Q96RU3 617 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ESYT2A0FGR8 921 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 LONRF2Q1L5Z9 754 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 TADA2BQ86TJ2 420 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 MYO9BQ13459 2157 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 STX1BP61266 288 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 TAF12Q16514 161 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ARMC2Q8NEN0 867 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 PHKBQ93100 1093 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 UPF3AQ9H1J1 476 aaKnown RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ZNF277Q9NRM2 450 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 DBNLQ9UJU6 430 aaKnown RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 SPAG7O75391 227 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 TNNI2P48788 182 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 EPHB4P54760 987 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ARHGAP44Q17R89 818 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 DHX32Q7L7V1 743 aaKnown RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 VWA3AA6NCI4 1184 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 S100BP04271 92 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 HNRNPCP07910 306 aaKnown RBP eCLIP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 SNX1Q13596 522 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 C8orf34Q49A92 452 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ANO1Q5XXA6 986 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 TMEM132EQ6IEE7 984 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 CABP1Q9NZU7 370 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 NCOA1Q15788 1441 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 UNC13AQ9UPW8 1703 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 GNGT2O14610 69 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ATF2P15336 505 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ADCY8P40145 1251 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 POSTNQ15063 836 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 UBE3BQ7Z3V4 1068 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 KIAA2013Q8IYS2 634 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 C17orf53Q8N3J3 647 aaPredicted RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 SCYL1Q96KG9 808 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 UIMC1Q96RL1 719 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 PDE1AP54750 535 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 CAPRIN2Q6IMN6 1127 aaKnown RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 PHLPP2Q6ZVD8 1323 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ZRANB2O95218 330 aaKnown RBP eCLIP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 PLCG2P16885 1265 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 TCP1P17987 556 aaKnown RBP6.77□□□□□ -1.33
CSMD1-201ENST00000335551 MTX1Q13505 466 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 CERS3Q8IU89 383 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 ANLNQ9NQW6 1124 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.33
CSMD1-201ENST00000335551 E2F4Q16254 413 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 PIK3R5Q8WYR1 880 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 ANKRD2Q9GZV1 360 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 NFE2L3Q9Y4A8 694 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 AK2P54819 239 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 MRPS15P82914 257 aaKnown RBP6.76□□□□□ -1.33
CSMD1-201ENST00000335551 KLHL29Q96CT2 875 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 PTPDC1A2A3K4 754 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 INTS9Q9NV88 658 aaKnown RBP6.76□□□□□ -1.33
CSMD1-201ENST00000335551 NINQ8N4C6 2090 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 GSTA4O15217 222 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 TSC22D4Q9Y3Q8 395 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 KRT75O95678 551 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 KPNA2P52292 529 aaKnown RBP6.76□□□□□ -1.33
CSMD1-201ENST00000335551 TEX12Q9BXU0 123 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 SLC12A5Q9H2X9 1139 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 PDE4DIPQ5VU43 2346 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 CDC25BP30305 580 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 TRPC1P48995 793 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 ARHGEF18Q6ZSZ5 1173 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 POMGNT1Q8WZA1 660 aa6.76□□□□□ -1.33
CSMD1-201ENST00000335551 LRRC2Q9BYS8 371 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms