RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 EMILIN1Q9Y6C2 1016 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 EEF1GP26641 437 aaKnown RBP18.04■□□□□ 0.48
PTCH1-201ENST00000331920 PAK1Q13153 545 aa18.04■□□□□ 0.48
PTCH1-201ENST00000331920 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
PTCH1-201ENST00000331920 TRAPPC10P48553 1259 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 TRIM14Q14142 442 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 PARP2Q9UGN5 583 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ANKRD20A4Q4UJ75 823 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ANKRD20A8PQ5CZ79 823 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ANKRD20A2Q5SQ80 823 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ANKRD20A1Q5TYW2 823 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ATP6V0A1Q93050 837 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 TTF2Q9UNY4 1162 aaKnown RBP18.03■□□□□ 0.48
PTCH1-201ENST00000331920 SART1O43290 800 aaKnown RBP18.03■□□□□ 0.48
PTCH1-201ENST00000331920 FAM193BQ96PV7 902 aaPredicted RBP18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ARHGDIAP52565 204 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 NEUROG2Q9H2A3 272 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 SLC13A4Q9UKG4 626 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 LONP1P36776 959 aaKnown RBP18.03■□□□□ 0.48
PTCH1-201ENST00000331920 AK2P54819 239 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 NUCB1Q02818 461 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 IFNL2Q8IZJ0 200 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ERO1AQ96HE7 468 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 ESYT1Q9BSJ8 1104 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 BMP2KLQ5H9B9 411 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 SFMBT2Q5VUG0 894 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 HACE1Q8IYU2 909 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 RIC8AQ9NPQ8 531 aa18.03■□□□□ 0.48
PTCH1-201ENST00000331920 FGD6Q6ZV73 1430 aa18.02■□□□□ 0.48
PTCH1-201ENST00000331920 WBP4O75554 376 aaKnown RBP18.02■□□□□ 0.48
PTCH1-201ENST00000331920 LRRD1A4D1F6 860 aa18.02■□□□□ 0.48
PTCH1-201ENST00000331920 XAGE3Q8WTP9 111 aa18.02■□□□□ 0.48
PTCH1-201ENST00000331920 CALCRLQ16602 461 aa18.02■□□□□ 0.48
PTCH1-201ENST00000331920 PPFIA4O75335 1185 aa18.02■□□□□ 0.48
PTCH1-201ENST00000331920 FLOT1O75955 427 aa18.02■□□□□ 0.48
PTCH1-201ENST00000331920 SNX1Q13596 522 aa18.02■□□□□ 0.48
PTCH1-201ENST00000331920 NR1I2O75469 434 aa18.02■□□□□ 0.47
PTCH1-201ENST00000331920 ASPHQ12797 758 aa18.02■□□□□ 0.47
PTCH1-201ENST00000331920 HERC4Q5GLZ8 1057 aaPredicted RBP18.02■□□□□ 0.47
PTCH1-201ENST00000331920 IWS1Q96ST2 819 aa18.02■□□□□ 0.47
PTCH1-201ENST00000331920 FAM95CA0A1B0GW59 222 aa18.02■□□□□ 0.47
PTCH1-201ENST00000331920 LMNB1P20700 586 aa18.02■□□□□ 0.47
PTCH1-201ENST00000331920 HABP4Q5JVS0 413 aaKnown RBP18.02■□□□□ 0.47
PTCH1-201ENST00000331920 FAM102BQ5T8I3 360 aa18.02■□□□□ 0.47
PTCH1-201ENST00000331920 TAB2Q9NYJ8 693 aa18.02■□□□□ 0.47
PTCH1-201ENST00000331920 PRPSAP1Q14558 356 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 POC1B-GALNT4F8VUJ3 575 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 CYP2J2P51589 502 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 THEGQ9P2T0 379 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 AMFRQ9UKV5 643 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 DNM3Q9UQ16 869 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 KCNK3O14649 394 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 TCP10Q12799 353 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 BRAPQ7Z569 592 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 SLF1Q9BQI6 1058 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 SERPINI2O75830 405 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 CLCN1P35523 988 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 RRAGAQ7L523 313 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 C17orf53Q8N3J3 647 aaPredicted RBP18.01■□□□□ 0.47
PTCH1-201ENST00000331920 PAGR1Q9BTK6 254 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 PMS1P54277 932 aaKnown RBP18.01■□□□□ 0.47
PTCH1-201ENST00000331920 RAB44Q7Z6P3 723 aaPredicted RBP18.01■□□□□ 0.47
PTCH1-201ENST00000331920 TPH2Q8IWU9 490 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 C8orf37Q96NL8 207 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 STK25O00506 426 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 HAUS1Q96CS2 278 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 MRFAP1L1Q96HT8 127 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 SUGT1Q9Y2Z0 365 aa18.01■□□□□ 0.47
PTCH1-201ENST00000331920 ESRRGP62508 458 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 GNGT1P63211 74 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 SCYL3Q8IZE3 742 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 SH2D4AQ9H788 454 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 FAM207AQ9NSI2 230 aaPredicted RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 GARSP41250 739 aaKnown RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 RINLQ6ZS11 566 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 CROCCP2Q86T23 111 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 LSM14BQ9BX40 385 aaKnown RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 KRIT1O00522 736 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 CREB3L3Q68CJ9 461 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 TEX11Q8IYF3 940 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 U2AF1L4Q8WU68 220 aaKnown RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 TBC1D32Q96NH3 1257 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 DRC3Q9H069 523 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 NLRC4Q9NPP4 1024 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 LMBR1LQ6UX01 489 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 NFKBIL1Q9UBC1 381 aaPredicted RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 BUB1O43683 1085 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 GPC4O75487 556 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 ADCY1Q08828 1119 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 NELFBQ8WX92 580 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 EVI5O60447 810 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 FLOT2Q14254 428 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 EAPPQ56P03 285 aaPredicted RBP18■□□□□ 0.47
PTCH1-201ENST00000331920 LRRC8CQ8TDW0 803 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 A6NNZ2 444 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 TUBB8Q3ZCM7 444 aa18■□□□□ 0.47
PTCH1-201ENST00000331920 ZC3H12BQ5HYM0 836 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms