RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CCT6AP40227 531 aaKnown RBP18.93■□□□□ 0.62
SSH1-201ENST00000326470 MAP3K12Q12852 859 aa18.93■□□□□ 0.62
SSH1-201ENST00000326470 NOA1Q8NC60 698 aaKnown RBP18.93■□□□□ 0.62
SSH1-201ENST00000326470 NUP133Q8WUM0 1156 aa18.93■□□□□ 0.62
SSH1-201ENST00000326470 RNF26Q9BY78 433 aaPredicted RBP18.93■□□□□ 0.62
SSH1-201ENST00000326470 ACBD3Q9H3P7 528 aa18.93■□□□□ 0.62
SSH1-201ENST00000326470 MED4Q9NPJ6 270 aa18.93■□□□□ 0.62
SSH1-201ENST00000326470 TOMM22Q9NS69 142 aa18.93■□□□□ 0.62
SSH1-201ENST00000326470 CHD4Q14839 1912 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 FAM205CA6NFA0 338 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 N4BP3O15049 544 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 BMP15O95972 392 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 SPATA5Q8NB90 893 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 CCDC102AQ96A19 550 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 SHISA4Q96DD7 197 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 CTNND2Q9UQB3 1225 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 XBP1P17861 261 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 TRIM14Q14142 442 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 LPIN2Q92539 896 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 NACAP1Q9BZK3 213 aa18.92■□□□□ 0.62
SSH1-201ENST00000326470 SPAG1Q07617 926 aa18.91■□□□□ 0.62
SSH1-201ENST00000326470 GIGYF2Q6Y7W6 1299 aaKnown RBP18.91■□□□□ 0.62
SSH1-201ENST00000326470 NLRP10Q86W26 655 aa18.91■□□□□ 0.62
SSH1-201ENST00000326470 RSPH14Q9UHP6 348 aa18.91■□□□□ 0.62
SSH1-201ENST00000326470 LRRIQ3A6PVS8 624 aaPredicted RBP18.91■□□□□ 0.62
SSH1-201ENST00000326470 RNF225M0QZC1 329 aaPredicted RBP18.91■□□□□ 0.62
SSH1-201ENST00000326470 PRKAB2O43741 272 aa18.91■□□□□ 0.62
SSH1-201ENST00000326470 GNAT2P19087 354 aa18.91■□□□□ 0.62
SSH1-201ENST00000326470 KRT2P35908 639 aa18.91■□□□□ 0.62
SSH1-201ENST00000326470 TDO2P48775 406 aa18.91■□□□□ 0.62
SSH1-201ENST00000326470 PUM3Q15397 648 aaKnown RBP18.91■□□□□ 0.62
SSH1-201ENST00000326470 EARS2Q5JPH6 523 aaKnown RBP18.91■□□□□ 0.62
SSH1-201ENST00000326470 NUP88Q99567 741 aaPredicted RBP18.91■□□□□ 0.62
SSH1-201ENST00000326470 MKRN1Q9UHC7 482 aaKnown RBP18.91■□□□□ 0.62
SSH1-201ENST00000326470 FGFR2P21802 821 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 CDC25AP30304 524 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 COPB1P53618 953 aaKnown RBP18.9■□□□□ 0.62
SSH1-201ENST00000326470 PPP2R5BQ15173 497 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 SLF1Q9BQI6 1058 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 PHF20Q9BVI0 1012 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 VIPAS39Q9H9C1 493 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 RWDD2AQ9UIY3 292 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 TNNT3P45378 269 aaPredicted RBP18.9■□□□□ 0.62
SSH1-201ENST00000326470 AKAP17AQ02040 695 aaKnown RBP18.9■□□□□ 0.62
SSH1-201ENST00000326470 NCAPH2Q6IBW4 605 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 VPS16Q9H269 839 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 RNF41Q9H4P4 317 aaPredicted RBP18.9■□□□□ 0.62
SSH1-201ENST00000326470 VPS54Q9P1Q0 977 aa18.9■□□□□ 0.62
SSH1-201ENST00000326470 GPTP24298 496 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 KRT9P35527 623 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
SSH1-201ENST00000326470 PKN1Q16512 942 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 CCDC148Q8NFR7 591 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 ZBTB9Q96C00 473 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 SLC4A4Q9Y6R1 1079 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 XDHP47989 1333 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 PNPLA7Q6ZV29 1317 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 IRS4O14654 1257 aaPredicted RBP18.89■□□□□ 0.61
SSH1-201ENST00000326470 RASGRF1Q13972 1273 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 RRAGBQ5VZM2 374 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 FOXR1Q6PIV2 292 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 LCORLQ8N3X6 602 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 ANKRD20A12PQ8NF67 263 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 UBAC1Q9BSL1 405 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 EFCC1Q9HA90 598 aa18.89■□□□□ 0.61
SSH1-201ENST00000326470 EPN1Q9Y6I3 576 aaPredicted RBP18.89■□□□□ 0.61
SSH1-201ENST00000326470 PHACTR2O75167 634 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 AARSP49588 968 aaKnown RBP eCLIP18.88■□□□□ 0.61
SSH1-201ENST00000326470 HLFQ16534 295 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 TCP11X2Q5H9J9 407 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 TRAPPC11Q7Z392 1133 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 IPO4Q8TEX9 1081 aaKnown RBP18.88■□□□□ 0.61
SSH1-201ENST00000326470 PRDM11Q9NQV5 511 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 PSMD14O00487 310 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 WNT7AO00755 349 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 COBLO75128 1261 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 USP14P54578 494 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 E2F4Q16254 413 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 TAB2Q9NYJ8 693 aa18.88■□□□□ 0.61
SSH1-201ENST00000326470 REXO2Q9Y3B8 237 aaKnown RBP18.88■□□□□ 0.61
SSH1-201ENST00000326470 MYH8P13535 1937 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 NDUFA10O95299 355 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 PAK1Q13153 545 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 SEC23AQ15436 765 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 NOM1Q5C9Z4 860 aaKnown RBP18.87■□□□□ 0.61
SSH1-201ENST00000326470 LRRC31Q6UY01 552 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 CTCFLQ8NI51 663 aaPredicted RBP18.87■□□□□ 0.61
SSH1-201ENST00000326470 STAMQ92783 540 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 CHP1Q99653 195 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 FAM204AQ9H8W3 233 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 RTL9Q8NET4 1388 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 MROH5Q6ZUA9 1318 aa18.87■□□□□ 0.61
SSH1-201ENST00000326470 KCNJ18B7U540 433 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 PRPF3O43395 683 aaKnown RBP18.86■□□□□ 0.61
SSH1-201ENST00000326470 MCM3P25205 808 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 FUT2Q10981 343 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 KCNJ12Q14500 433 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 ZNF174Q15697 407 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 TOM1L2Q6ZVM7 507 aa18.86■□□□□ 0.61
SSH1-201ENST00000326470 DNAJC10Q8IXB1 793 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms