RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 SNAP23O00161 211 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 SCG2P13521 617 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 UBA7P41226 1012 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 CETN1Q12798 172 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 RMND1Q9NWS8 449 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 GLI3P10071 1580 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 A0A1W2PQ27 194 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 A0A1W2PQ64 194 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 A0A1W2PQD8 194 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 TCRBV5S4A2TA0A5A2 114 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 NBPF3Q9H094 633 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 DAGLAQ9Y4D2 1042 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 CDK8P49336 464 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 PTF1AQ7RTS3 328 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 HEATR3Q7Z4Q2 680 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 TBC1D10CQ8IV04 446 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 GOLGA6L1Q8N7Z2 621 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 ITGB4P16144 1822 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 FOSP01100 380 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 FDX1P10109 184 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 FAM160A1Q05DH4 1040 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 STX1AQ16623 288 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 FKBP1CQ5VVH2 108 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 POTEAQ6S8J7 498 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 LRSAM1Q6UWE0 723 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 GPBP1L1Q9HC44 474 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 CNPY2Q9Y2B0 182 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 ABCB5Q2M3G0 1257 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 ZKSCAN3Q9BRR0 538 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 EHD4Q9H223 541 aa9.72□□□□□ -0.85
PDLIM5-201ENST00000317968 LAD1O00515 517 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 SYKP43405 635 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 USP14P54578 494 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 NCOA5Q9HCD5 579 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 RNF181Q9P0P0 153 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 CD2BP2O95400 341 aaKnown RBP9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 CFAP100Q494V2 611 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 C3orf67Q6ZVT6 689 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 NOSTRINQ8IVI9 506 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 POLR3EQ9NVU0 708 aa9.71□□□□□ -0.85
PDLIM5-201ENST00000317968 ZBTB7AO95365 584 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 ICA1Q05084 483 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 CNNM3Q8NE01 707 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 SH3RF3Q8TEJ3 882 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 DCAF4Q8WV16 495 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 ZDHHC15Q96MV8 337 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 RTEL1Q9NZ71 1219 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 PNMA3Q9UL41 463 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 LEO1Q8WVC0 666 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 SYNPO2Q9UMS6 1093 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 RABGAP1Q9Y3P9 1069 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 THSD7AQ9UPZ6 1657 aa9.71□□□□□ -0.86
PDLIM5-201ENST00000317968 JAK2O60674 1132 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 SCNN1DP51172 638 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 R3HDM1Q15032 1099 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 APOBEC3FQ8IUX4 373 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 KLRF2D3W0D1 207 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 PRKG1Q13976 671 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 GADL1Q6ZQY3 521 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 HACE1Q8IYU2 909 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 LY9Q9HBG7 655 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 POLLQ9UGP5 575 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 ADD1P35611 737 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 ADCY7P51828 1080 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 ZNF445P59923 1031 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 ADALQ6DHV7 355 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 TMTC3Q6ZXV5 915 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 FAM160B2Q86V87 743 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 GAKO14976 1311 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 ASNSP08243 561 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 PLCD1P51178 756 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 HOMER1Q86YM7 354 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 OSBPL5Q9H0X9 879 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 LMBRD1Q9NUN5 540 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 CLIP2Q9UDT6 1046 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 C16orf86Q6ZW13 317 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 ZNF831Q5JPB2 1677 aa9.7□□□□□ -0.86
PDLIM5-201ENST00000317968 CETN2P41208 172 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 TAF12Q16514 161 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 FAM47AQ5JRC9 791 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 STOX1Q6ZVD7 989 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 IQUBQ8NA54 791 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 CSRNP1Q96S65 589 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 RCOR1Q9UKL0 485 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 BICD1Q96G01 975 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 TBCAO75347 108 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 DPEP1P16444 411 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 GRM4Q14833 912 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 CDC37L1Q7L3B6 337 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 DEFB132Q7Z7B7 95 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 RAB11FIP4Q86YS3 637 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 FAM151AQ8WW52 585 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 SLC10A4Q96EP9 437 aa9.69□□□□□ -0.86
PDLIM5-201ENST00000317968 EPB41L4AQ9HCS5 686 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms