RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 COL4A5P29400 1685 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 DDAH1O94760 285 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 BRD2P25440 801 aaKnown RBP14.98□□□□□ -0.01
CPNE1-201ENST00000317677 AOC3Q16853 763 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 DACT2Q5SW24 774 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 ATL3Q6DD88 541 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 C16orf86Q6ZW13 317 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 BRAPQ7Z569 592 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 CATIPQ7Z7H3 387 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 ZNF396Q96N95 335 aaPredicted RBP14.98□□□□□ -0.01
CPNE1-201ENST00000317677 FUCA2Q9BTY2 467 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 TMX4Q9H1E5 349 aaPredicted RBP14.98□□□□□ -0.01
CPNE1-201ENST00000317677 RTEL1Q9NZ71 1219 aa14.98□□□□□ -0.01
CPNE1-201ENST00000317677 CNTNAP5Q8WYK1 1306 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 CCDC196A0A1B0GTZ2 297 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 CDK8P49336 464 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 APOBEC3HQ6NTF7 200 aaKnown RBP14.97□□□□□ -0.01
CPNE1-201ENST00000317677 TMTC3Q6ZXV5 915 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 TTLL6Q8N841 843 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 ANKS1AQ92625 1134 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 KCNJ14Q9UNX9 436 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 MYH8P13535 1937 aa14.97□□□□□ -0.01
CPNE1-201ENST00000317677 hCG_1642624A0A1W2PR95 340 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 C21orf2O43822 256 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 DEXIO95424 95 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 HNRNPH2P55795 449 aaKnown RBP14.96□□□□□ -0.01
CPNE1-201ENST00000317677 MUM1L1Q5H9M0 696 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 CDC42EP5Q6NZY7 148 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 SRBD1Q8N5C6 995 aaKnown RBP14.96□□□□□ -0.01
CPNE1-201ENST00000317677 LINC00301Q8NCQ3 95 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 CCDC112Q8NEF3 446 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.96□□□□□ -0.01
CPNE1-201ENST00000317677 RNF26Q9BY78 433 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-201ENST00000317677 GOLPH3LQ9H4A5 285 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 BAZ2BQ9UIF8 2168 aaKnown RBP14.96□□□□□ -0.01
CPNE1-201ENST00000317677 YDJCA8MPS7 323 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 NR1I2O75469 434 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 PPP2R5BQ15173 497 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 MKNK2Q9HBH9 465 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 GPBP1L1Q9HC44 474 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-201ENST00000317677 TCP11L1Q9NUJ3 509 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 RNF216Q9NWF9 866 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-201ENST00000317677 DACT1Q9NYF0 836 aa14.96□□□□□ -0.01
CPNE1-201ENST00000317677 G3V3G9 751 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 MMP1P03956 469 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 GABPAQ06546 454 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 PICALMQ13492 652 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 DCAF8Q5TAQ9 597 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 STRIP1Q5VSL9 837 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 AMOTL1Q8IY63 956 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 TRIM22Q8IYM9 498 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 POLR3EQ9NVU0 708 aa14.95□□□□□ -0.02
CPNE1-201ENST00000317677 BTBD18B2RXH4 712 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 PRPF3O43395 683 aaKnown RBP14.94□□□□□ -0.02
CPNE1-201ENST00000317677 CALM1P0DP23 149 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 CALM2P0DP24 149 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 CALM3P0DP25 149 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 CRKP46108 304 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 SLC35G1Q2M3R5 365 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 KMT5BQ4FZB7 885 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 RASGRP2Q7LDG7 609 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 DGKHQ86XP1 1220 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 KIAA0825Q8IV33 1275 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 BICD2Q8TD16 824 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 USP40Q9NVE5 1235 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
CPNE1-201ENST00000317677 PCDHA7Q9UN72 937 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 GREB1LQ9C091 1923 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-201ENST00000317677 CLGNO14967 610 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 SLURP2P0DP57 97 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 VEGFAP15692 232 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-201ENST00000317677 NOP2P46087 812 aaKnown RBP14.94□□□□□ -0.02
CPNE1-201ENST00000317677 FKBP1AP62942 108 aaKnown RBP14.94□□□□□ -0.02
CPNE1-201ENST00000317677 NFIAQ12857 509 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 OXER1Q8TDS5 423 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 WASF1Q92558 559 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 TEKT1Q969V4 418 aa14.94□□□□□ -0.02
CPNE1-201ENST00000317677 V9GY48 417 aaPredicted RBP14.94□□□□□ -0.02
CPNE1-201ENST00000317677 GOLGA6L4A6NEF3 574 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 YEATS4O95619 227 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 TSPY3P0CV98 308 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 TSPY8P0CW00 308 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 PSEN1P49768 467 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 NT5C2P49902 561 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 PTPAQ15257 358 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 AXDND1Q5T1B0 1012 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 ANO1Q5XXA6 986 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 DIS3L2Q8IYB7 885 aaKnown RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 ZNF444Q8N0Y2 327 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 STAG2Q8N3U4 1231 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 PNMA1Q8ND90 353 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 MAP3K14Q99558 947 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 VPS54Q9P1Q0 977 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 SBF1O95248 1867 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 TNNT1P13805 278 aa14.93□□□□□ -0.02
CPNE1-201ENST00000317677 TOB1P50616 345 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-201ENST00000317677 RAD51AP2Q09MP3 1159 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms