RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 MFSD5Q6N075 450 aa19.21■□□□□ 0.67
UBXN1-201ENST00000294119 CATSPERGQ6ZRH7 1159 aa19.21■□□□□ 0.67
UBXN1-201ENST00000294119 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
UBXN1-201ENST00000294119 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
UBXN1-201ENST00000294119 USP34Q70CQ2 3546 aa19.21■□□□□ 0.67
UBXN1-201ENST00000294119 CIAO1O76071 339 aa19.2■□□□□ 0.66
UBXN1-201ENST00000294119 ADORA2AP29274 412 aa19.2■□□□□ 0.66
UBXN1-201ENST00000294119 ADORA1P30542 326 aa19.2■□□□□ 0.66
UBXN1-201ENST00000294119 MRE11P49959 708 aa19.2■□□□□ 0.66
UBXN1-201ENST00000294119 RAB30Q15771 203 aa19.2■□□□□ 0.66
UBXN1-201ENST00000294119 CCDC129Q6ZRS4 1044 aa19.2■□□□□ 0.66
UBXN1-201ENST00000294119 ARHGAP45Q92619 1136 aa19.2■□□□□ 0.66
UBXN1-201ENST00000294119 NSUN4Q96CB9 384 aaKnown RBP19.2■□□□□ 0.66
UBXN1-201ENST00000294119 DHX36Q9H2U1 1008 aaKnown RBP19.2■□□□□ 0.66
UBXN1-201ENST00000294119 SPDYE16A6NNV3 312 aaPredicted RBP19.19■□□□□ 0.66
UBXN1-201ENST00000294119 STRNO43815 780 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 TLL1O43897 1013 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 COBLO75128 1261 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 BCAR3O75815 825 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 PRAMEF19Q5SWL8 479 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 HERVK_113Q902F9 699 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 USP44Q9H0E7 712 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 A0A0G2JMZ2 1700 aa19.19■□□□□ 0.66
UBXN1-201ENST00000294119 PRRC2BQ5JSZ5 2229 aaKnown RBP19.19■□□□□ 0.66
UBXN1-201ENST00000294119 FOCADQ5VW36 1801 aa19.18■□□□□ 0.66
UBXN1-201ENST00000294119 CDK5RAP2Q96SN8 1893 aa19.18■□□□□ 0.66
UBXN1-201ENST00000294119 GDF11O95390 407 aa19.18■□□□□ 0.66
UBXN1-201ENST00000294119 MYCNP04198 464 aaPredicted RBP19.18■□□□□ 0.66
UBXN1-201ENST00000294119 POU3F3P20264 500 aaPredicted RBP19.18■□□□□ 0.66
UBXN1-201ENST00000294119 RRP1P56182 461 aaKnown RBP19.18■□□□□ 0.66
UBXN1-201ENST00000294119 PPIGQ13427 754 aaKnown RBP eCLIP19.18■□□□□ 0.66
UBXN1-201ENST00000294119 ERICH6Q7L0X2 663 aa19.18■□□□□ 0.66
UBXN1-201ENST00000294119 DPP9Q86TI2 863 aa19.18■□□□□ 0.66
UBXN1-201ENST00000294119 CEP126Q9P2H0 1117 aa19.18■□□□□ 0.66
UBXN1-201ENST00000294119 NRBP1Q9UHY1 535 aa19.18■□□□□ 0.66
UBXN1-201ENST00000294119 YBX2Q9Y2T7 364 aaKnown RBP19.18■□□□□ 0.66
UBXN1-201ENST00000294119 PI4K2BG5E9Z4 385 aa19.17■□□□□ 0.66
UBXN1-201ENST00000294119 CCDC174Q6PII3 467 aa19.17■□□□□ 0.66
UBXN1-201ENST00000294119 FOXP4Q8IVH2 680 aaPredicted RBP19.17■□□□□ 0.66
UBXN1-201ENST00000294119 NKX2-4Q9H2Z4 354 aa19.17■□□□□ 0.66
UBXN1-201ENST00000294119 XPNPEP3Q9NQH7 507 aa19.17■□□□□ 0.66
UBXN1-201ENST00000294119 MSRAQ9UJ68 235 aa19.17■□□□□ 0.66
UBXN1-201ENST00000294119 FAM86C2PA6NEL3 165 aa19.16■□□□□ 0.66
UBXN1-201ENST00000294119 VCAM1P19320 739 aa19.16■□□□□ 0.66
UBXN1-201ENST00000294119 ZKSCAN2Q63HK3 967 aa19.16■□□□□ 0.66
UBXN1-201ENST00000294119 PSRC1Q6PGN9 363 aaPredicted RBP19.16■□□□□ 0.66
UBXN1-201ENST00000294119 TEX11Q8IYF3 940 aa19.16■□□□□ 0.66
UBXN1-201ENST00000294119 SHCBP1Q8NEM2 672 aa19.16■□□□□ 0.66
UBXN1-201ENST00000294119 MOV10L1Q9BXT6 1211 aaKnown RBP19.16■□□□□ 0.66
UBXN1-201ENST00000294119 DCDC2CA8MYV0 355 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 ADAMTS4O75173 837 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 LDHCP07864 332 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 ZNF365Q70YC5 407 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 RNF180Q86T96 592 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 ABRAQ8N0Z2 381 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 MAML3Q96JK9 1138 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 TSEN34Q9BSV6 310 aaKnown RBP19.15■□□□□ 0.66
UBXN1-201ENST00000294119 API5Q9BZZ5 524 aaKnown RBP19.15■□□□□ 0.66
UBXN1-201ENST00000294119 KIAA1683Q9H0B3 1180 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 SLC28A3Q9HAS3 691 aa19.15■□□□□ 0.66
UBXN1-201ENST00000294119 CFAP54Q96N23 3096 aa19.14■□□□□ 0.66
UBXN1-201ENST00000294119 SMIM22K7EJ46 135 aa19.14■□□□□ 0.65
UBXN1-201ENST00000294119 PGK1P00558 417 aa19.14■□□□□ 0.65
UBXN1-201ENST00000294119 NEFLP07196 543 aa19.14■□□□□ 0.65
UBXN1-201ENST00000294119 RARBP10826 455 aa19.14■□□□□ 0.65
UBXN1-201ENST00000294119 CSF2RAP15509 400 aa19.14■□□□□ 0.65
UBXN1-201ENST00000294119 GSTO1P78417 241 aa19.14■□□□□ 0.65
UBXN1-201ENST00000294119 SH3RF3Q8TEJ3 882 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-201ENST00000294119 FRAT1Q92837 279 aaPredicted RBP19.14■□□□□ 0.65
UBXN1-201ENST00000294119 NOB1Q9ULX3 412 aaKnown RBP19.14■□□□□ 0.65
UBXN1-201ENST00000294119 PRR33A8MZF0 331 aa19.13■□□□□ 0.65
UBXN1-201ENST00000294119 CDK7P50613 346 aa19.13■□□□□ 0.65
UBXN1-201ENST00000294119 CCSAPQ6IQ19 270 aaPredicted RBP19.13■□□□□ 0.65
UBXN1-201ENST00000294119 ATF7IPQ6VMQ6 1270 aa19.13■□□□□ 0.65
UBXN1-201ENST00000294119 COG5Q9UP83 839 aa19.13■□□□□ 0.65
UBXN1-201ENST00000294119 FLT1P17948 1338 aa19.12■□□□□ 0.65
UBXN1-201ENST00000294119 ACRP10323 421 aa19.12■□□□□ 0.65
UBXN1-201ENST00000294119 IL15P40933 162 aaPredicted RBP19.12■□□□□ 0.65
UBXN1-201ENST00000294119 USP14P54578 494 aa19.12■□□□□ 0.65
UBXN1-201ENST00000294119 SIL1Q9H173 461 aa19.12■□□□□ 0.65
UBXN1-201ENST00000294119 CD320Q9NPF0 282 aa19.12■□□□□ 0.65
UBXN1-201ENST00000294119 MTCH2Q9Y6C9 303 aa19.12■□□□□ 0.65
UBXN1-201ENST00000294119 CACNA1AO00555 2505 aa19.12■□□□□ 0.65
UBXN1-201ENST00000294119 GH2P01242 217 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 ERCC3P19447 782 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 ACLYP53396 1101 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 NHLH1Q02575 133 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 KLHDC9Q8NEP7 349 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 SPATC1LQ9H0A9 340 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 STARD7Q9NQZ5 370 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 SLC5A4Q9NY91 659 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 HMG20BQ9P0W2 317 aa19.11■□□□□ 0.65
UBXN1-201ENST00000294119 ZNFX1Q9P2E3 1918 aaKnown RBP19.11■□□□□ 0.65
UBXN1-201ENST00000294119 ZNF865P0CJ78 1059 aaPredicted RBP19.1■□□□□ 0.65
UBXN1-201ENST00000294119 PPP4CP60510 307 aa19.1■□□□□ 0.65
UBXN1-201ENST00000294119 TIMM10P62072 90 aa19.1■□□□□ 0.65
UBXN1-201ENST00000294119 ZYXQ15942 572 aaKnown RBP19.1■□□□□ 0.65
UBXN1-201ENST00000294119 TATDN1Q6P1N9 297 aa19.1■□□□□ 0.65
UBXN1-201ENST00000294119 TMEM199Q8N511 208 aa19.1■□□□□ 0.65
UBXN1-201ENST00000294119 NUP133Q8WUM0 1156 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms