RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 PPFIBP1Q86W92 1011 aa8.55□□□□□ -1.04
GAPVD1-201ENST00000265956 DZIP1Q86YF9 867 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-201ENST00000265956 STAG2Q8N3U4 1231 aa8.55□□□□□ -1.04
GAPVD1-201ENST00000265956 ZNF579Q8NAF0 562 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-201ENST00000265956 VPS16Q9H269 839 aa8.55□□□□□ -1.04
GAPVD1-201ENST00000265956 MRPL44Q9H9J2 332 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-201ENST00000265956 ZNF804BA4D1E1 1349 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 USP17L3A6NCW0 530 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 USP17L4A6NCW7 530 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 PP2D1A8MPX8 630 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 CCP110O43303 1012 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 GOLGA8HP0CJ92 632 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 TFAP4Q01664 338 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 TBX2Q13207 712 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 CUL4BQ13620 913 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 NR1I3Q14994 352 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 NPY5RQ15761 445 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 USP17L1Q7RTZ2 530 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 KRT222Q8N1A0 295 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 SLC44A5Q8NCS7 719 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 CCDC12Q8WUD4 166 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 CRNKL1Q9BZJ0 848 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 ANKIB1Q9P2G1 1089 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 SAP30BPQ9UHR5 308 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 ANAPC4Q9UJX5 808 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 PARP3Q9Y6F1 533 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 DOT1LQ8TEK3 1739 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 STRCQ7RTU9 1775 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 AKR1B15C9JRZ8 316 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 TFRCP02786 760 aaKnown RBP8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 SCG2P13521 617 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 CASP14P31944 242 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 USP5P45974 858 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 IL17AQ16552 155 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 CCDC34Q96HJ3 373 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 NLRP3Q96P20 1036 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 BRIP1Q9BX63 1249 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 STX8Q9UNK0 236 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 MORC2Q9Y6X9 1032 aaPredicted RBP8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 MYH6P13533 1939 aa8.54□□□□□ -1.04
GAPVD1-201ENST00000265956 MYH13Q9UKX3 1938 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 GNPATO15228 680 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 STX10O60499 249 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 SPATA1Q5VX52 437 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 KAT14Q9H8E8 782 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 MKNK2Q9HBH9 465 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 RBM28Q9NW13 759 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 TAB2Q9NYJ8 693 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 GDAQ9Y2T3 454 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 CNTNAP5Q8WYK1 1306 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 ERICH4A6NGS2 130 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 N4BP3O15049 544 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 ABL1P00519 1130 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 ERCC5P28715 1186 aaPredicted RBP8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 KCNJ6P48051 423 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 DHX8Q14562 1220 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 RAD9BQ6WBX8 426 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 AMIGO3Q86WK7 504 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 RGS22Q8NE09 1264 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 MTRQ99707 1265 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 PUF60Q9UHX1 559 aaKnown RBP8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 CICQ96RK0 1608 aaPredicted RBP8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 XDHP47989 1333 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 PHLPP2Q6ZVD8 1323 aa8.53□□□□□ -1.04
GAPVD1-201ENST00000265956 A0A1B0GTH6 734 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 TRIM49BA6NDI0 452 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 POLR3GO15318 223 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 ZPR1O75312 459 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 CALM1P0DP23 149 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 CALM2P0DP24 149 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 CALM3P0DP25 149 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 SF3B3Q15393 1217 aaKnown RBP8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 GRIK5Q16478 980 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 HEATR3Q7Z4Q2 680 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 TRIML1Q8N9V2 468 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 IQUBQ8NA54 791 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 SPATA20Q8TB22 786 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 FERMT2Q96AC1 680 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 VAT1LQ9HCJ6 419 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 FAM205AQ6ZU69 1335 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 RNF225M0QZC1 329 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 CCDC175P0C221 793 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 ATP2C1P98194 919 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 PPP2R3AQ06190 1150 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 PPP2R5BQ15173 497 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 INF2Q27J81 1249 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 FILIP1LQ4L180 1135 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 TYW1BQ6NUM6 668 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 TMCO3Q6UWJ1 677 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 FBXO33Q7Z6M2 555 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 PNMA1Q8ND90 353 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 ACRBPQ8NEB7 543 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 SH3RF3Q8TEJ3 882 aaPredicted RBP8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 TGFBRAP1Q8WUH2 860 aa8.52□□□□□ -1.05
GAPVD1-201ENST00000265956 TNFRSF25Q93038 417 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms