RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 IREB2P48200 963 aaKnown RBP22.35■■□□□ 1.17
SBDS-201ENST00000246868 HMGN5P82970 282 aaKnown RBP22.35■■□□□ 1.17
SBDS-201ENST00000246868 PRKG1Q13976 671 aa22.35■■□□□ 1.17
SBDS-201ENST00000246868 SCYL3Q8IZE3 742 aa22.35■■□□□ 1.17
SBDS-201ENST00000246868 KIF3AQ9Y496 699 aa22.35■■□□□ 1.17
SBDS-201ENST00000246868 CDC27P30260 824 aa22.35■■□□□ 1.17
SBDS-201ENST00000246868 GNAQP50148 359 aa22.35■■□□□ 1.17
SBDS-201ENST00000246868 DLK2Q6UY11 383 aa22.35■■□□□ 1.17
SBDS-201ENST00000246868 NSUN7Q8NE18 718 aaKnown RBP22.35■■□□□ 1.17
SBDS-201ENST00000246868 DOCK1Q14185 1865 aa22.34■■□□□ 1.17
SBDS-201ENST00000246868 USP2O75604 605 aaPredicted RBP22.34■■□□□ 1.17
SBDS-201ENST00000246868 TTLL12Q14166 644 aaPredicted RBP22.34■■□□□ 1.17
SBDS-201ENST00000246868 GRM4Q14833 912 aa22.34■■□□□ 1.17
SBDS-201ENST00000246868 FAM217BQ9NTX9 383 aaPredicted RBP22.34■■□□□ 1.17
SBDS-201ENST00000246868 PTPDC1A2A3K4 754 aa22.33■■□□□ 1.17
SBDS-201ENST00000246868 USP17L5A8MUK1 530 aa22.33■■□□□ 1.17
SBDS-201ENST00000246868 PARP1P09874 1014 aaKnown RBP22.33■■□□□ 1.17
SBDS-201ENST00000246868 GJB2P29033 226 aa22.33■■□□□ 1.17
SBDS-201ENST00000246868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.33■■□□□ 1.17
SBDS-201ENST00000246868 RAD21O60216 631 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 CTDNEP1O95476 244 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 MAP3K9P80192 1104 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 NOL9Q5SY16 702 aaKnown RBP22.32■■□□□ 1.16
SBDS-201ENST00000246868 ARMC9Q7Z3E5 817 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 SIAH1Q8IUQ4 282 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 TRIM22Q8IYM9 498 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 FAM184AQ8NB25 1140 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 SMARCC2Q8TAQ2 1214 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 ZKSCAN4Q969J2 545 aaPredicted RBP22.32■■□□□ 1.16
SBDS-201ENST00000246868 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
SBDS-201ENST00000246868 GOPCQ9HD26 462 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 FZD1Q9UP38 647 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 CSADQ9Y600 493 aa22.32■■□□□ 1.16
SBDS-201ENST00000246868 JAK2O60674 1132 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 PDHBP11177 359 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 IFNAR1P17181 557 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 GMCL1P1Q8NEA9 526 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 DDX11Q96FC9 970 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 LZTS2Q9BRK4 669 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 AS3MTQ9HBK9 375 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 TMX2Q9Y320 296 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 SSRP1Q08945 709 aaKnown RBP22.31■■□□□ 1.16
SBDS-201ENST00000246868 NTRK3Q16288 839 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 ASPRV1Q53RT3 343 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 SLFN13Q68D06 897 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 TMTC3Q6ZXV5 915 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 FEZ1Q99689 392 aa22.31■■□□□ 1.16
SBDS-201ENST00000246868 CIZ1Q9ULV3 898 aaPredicted RBP22.31■■□□□ 1.16
SBDS-201ENST00000246868 PDCP20941 246 aa22.3■■□□□ 1.16
SBDS-201ENST00000246868 AKAP17AQ02040 695 aaKnown RBP22.3■■□□□ 1.16
SBDS-201ENST00000246868 CHADLQ6NUI6 762 aa22.3■■□□□ 1.16
SBDS-201ENST00000246868 DCAF4Q8WV16 495 aa22.3■■□□□ 1.16
SBDS-201ENST00000246868 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.3■■□□□ 1.16
SBDS-201ENST00000246868 MAD2L2Q9UI95 211 aa22.3■■□□□ 1.16
SBDS-201ENST00000246868 A0A1W2PRG0 241 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 PALM3A6NDB9 673 aaPredicted RBP22.29■■□□□ 1.16
SBDS-201ENST00000246868 F5H6K3 240 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 TRAF5O00463 557 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 SNHG28P0DPA3 235 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 PTPRAP18433 802 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 SLC1A4P43007 532 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 KLRC3Q07444 240 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 CCDC96Q2M329 555 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 GPATCH4Q5T3I0 446 aaKnown RBP22.29■■□□□ 1.16
SBDS-201ENST00000246868 USP17L2Q6R6M4 530 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 ACER1Q8TDN7 264 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 ZNF408Q9H9D4 720 aa22.29■■□□□ 1.16
SBDS-201ENST00000246868 ORC3Q9UBD5 711 aaPredicted RBP22.29■■□□□ 1.16
SBDS-201ENST00000246868 ISY1Q9ULR0 285 aaKnown RBP22.29■■□□□ 1.16
SBDS-201ENST00000246868 PLEKHA8P1O95397 391 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 PDIA4P13667 645 aaKnown RBP22.28■■□□□ 1.16
SBDS-201ENST00000246868 ECE1P42892 770 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 MAP3K11Q16584 847 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 ANKRD13AQ8IZ07 590 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 CCDC82Q8N4S0 544 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 PHKBQ93100 1093 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 SLC26A6Q9BXS9 759 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 CHMP5Q9NZZ3 219 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 STK36Q9NRP7 1315 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 KLRF2D3W0D1 207 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 PPFIA3O75145 1194 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 FMNL1O95466 1100 aaPredicted RBP22.28■■□□□ 1.16
SBDS-201ENST00000246868 NDUFB10O96000 172 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 DDIT3P35638 169 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 ZNF543Q08ER8 600 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 VGLL4Q14135 290 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.28■■□□□ 1.16
SBDS-201ENST00000246868 CCDC84Q86UT8 332 aaPredicted RBP22.28■■□□□ 1.16
SBDS-201ENST00000246868 STAG2Q8N3U4 1231 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 WASF1Q92558 559 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 GMCL1Q96IK5 515 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 WDR18Q9BV38 432 aa22.28■■□□□ 1.16
SBDS-201ENST00000246868 DTNBO60941 627 aa22.27■■□□□ 1.16
SBDS-201ENST00000246868 GOLGA8HP0CJ92 632 aa22.27■■□□□ 1.16
SBDS-201ENST00000246868 LARP1BQ659C4 914 aaKnown RBP22.27■■□□□ 1.16
SBDS-201ENST00000246868 CMTR1Q8N1G2 835 aaKnown RBP22.27■■□□□ 1.16
SBDS-201ENST00000246868 SRBD1Q8N5C6 995 aaKnown RBP22.27■■□□□ 1.16
SBDS-201ENST00000246868 RNF26Q9BY78 433 aaPredicted RBP22.27■■□□□ 1.16
SBDS-201ENST00000246868 VCPKMTQ9H867 229 aa22.27■■□□□ 1.16
SBDS-201ENST00000246868 RBM27Q9P2N5 1060 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms