RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 USP17L2Q6R6M4 530 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 MXD3Q9BW11 206 aa11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 ABT1Q9ULW3 272 aaKnown RBP11.18□□□□□ -0.62
KCNMA1-228ENST00000638223 MED23Q9ULK4 1368 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 N4BP3O15049 544 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 GH2P01242 217 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 CSF1RP07333 972 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 CDK8P49336 464 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 PLA2G12BQ9BX93 195 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 PSTPIP2Q9H939 334 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 SCAF8Q9UPN6 1271 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 MYOM1P52179 1685 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 XRN1Q8IZH2 1706 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 CHD2O14647 1828 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 BTBD18B2RXH4 712 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 CHGBP05060 677 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 CETN1Q12798 172 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 DNAJC25Q9H1X3 360 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 RMND1Q9NWS8 449 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 TTLL1O95922 423 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 RAD51AP2Q09MP3 1159 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 ZNF397Q8NF99 534 aaPredicted RBP11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 STAMQ92783 540 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 CCPG1Q9ULG6 757 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 XIRP1Q702N8 1843 aaKnown RBP11.17□□□□□ -0.62
KCNMA1-228ENST00000638223 PSMA7O14818 248 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 TMEM87AQ8NBN3 555 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 INF2Q27J81 1249 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 ZSCAN23Q3MJ62 389 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 KIAA1328Q86T90 577 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 NUP88Q99567 741 aaPredicted RBP11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 PFKFB2O60825 505 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 SCG2P13521 617 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 ANO6Q4KMQ2 910 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 SNX29Q8TEQ0 813 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.16□□□□□ -0.625e-14■■■■■ 211.5
KCNMA1-228ENST00000638223 LRWD1Q9UFC0 647 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 PCP11498 1178 aaKnown RBP11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 FOXP4Q8IVH2 680 aaPredicted RBP11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 ZNRF3Q9ULT6 936 aa11.16□□□□□ -0.62
KCNMA1-228ENST00000638223 UBXN2AP68543 259 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 SCRN1Q12765 414 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 ARHGAP29Q52LW3 1261 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 MAPK8IP1Q9UQF2 711 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 PLEKHG2Q9H7P9 1386 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 PABPC4Q13310 644 aaKnown RBP eCLIP11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 TMC6Q7Z403 805 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 BLIDQ8IZY5 108 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 GOLGA6L1Q8N7Z2 621 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 DCP1AQ9NPI6 582 aaPredicted RBP11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
KCNMA1-228ENST00000638223 POLR2DO15514 142 aaKnown RBP11.15□□□□□ -0.63
KCNMA1-228ENST00000638223 BRDTQ58F21 947 aaPredicted RBP11.15□□□□□ -0.63
KCNMA1-228ENST00000638223 HS2ST1Q7LGA3 356 aa11.15□□□□□ -0.63
KCNMA1-228ENST00000638223 RASGRP4Q8TDF6 673 aa11.15□□□□□ -0.63
KCNMA1-228ENST00000638223 SLC10A4Q96EP9 437 aa11.15□□□□□ -0.63
KCNMA1-228ENST00000638223 WRNIP1Q96S55 665 aa11.15□□□□□ -0.63
KCNMA1-228ENST00000638223 MYO3BQ8WXR4 1341 aa11.15□□□□□ -0.63
KCNMA1-228ENST00000638223 BMP3P12645 472 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 DNA2P51530 1060 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 CALCRLQ16602 461 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 CHAMP1Q96JM3 812 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 SLC4A9Q96Q91 983 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 NAP1L4Q99733 375 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 ZNF341Q9BYN7 854 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 PHACTR2O75167 634 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 PRR16Q569H4 304 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 MYSM1Q5VVJ2 828 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 AOPEPQ8N6M6 819 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 CPVLQ9H3G5 476 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 MRPL11Q9Y3B7 192 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 DDAH1O94760 285 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 CNGA1P29973 690 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 GPATCH4Q5T3I0 446 aaKnown RBP11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 AMNQ9BXJ7 453 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 KCNH3Q9ULD8 1083 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 MROH7-TTC4A0A0A0MT08 1334 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 BCL9O00512 1426 aa11.14□□□□□ -0.63
KCNMA1-228ENST00000638223 ARHGEF35A5YM69 484 aa11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 CCDC169A6NNP5 214 aa11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 NECTIN1Q15223 517 aa11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 CCDC181Q5TID7 509 aa11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 ARHGEF16Q5VV41 709 aa11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 NLRX1Q86UT6 975 aa11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 CNOT7Q9UIV1 285 aaKnown RBP11.13□□□□□ -0.63
KCNMA1-228ENST00000638223 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms