RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 MTFR1Q15390 333 aa22.79■■□□□ 1.24
CLN6-213ENST00000636212 SLFNL1Q499Z3 407 aa22.79■■□□□ 1.24
CLN6-213ENST00000636212 KBTBD3Q8NAB2 608 aa22.79■■□□□ 1.24
CLN6-213ENST00000636212 CWC22Q9HCG8 908 aaKnown RBP22.79■■□□□ 1.24
CLN6-213ENST00000636212 TTC41PQ6P2S7 1318 aa22.79■■□□□ 1.24
CLN6-213ENST00000636212 ZFYP08048 801 aaPredicted RBP22.78■■□□□ 1.24
CLN6-213ENST00000636212 SEPT2Q15019 361 aa22.78■■□□□ 1.24
CLN6-213ENST00000636212 TMEM179Q6ZVK1 233 aa22.78■■□□□ 1.24
CLN6-213ENST00000636212 TNRC18O15417 2968 aaPredicted RBP22.77■■□□□ 1.24
CLN6-213ENST00000636212 CYP2D6P10635 497 aa22.77■■□□□ 1.24
CLN6-213ENST00000636212 ELNP15502 786 aa22.77■■□□□ 1.24
CLN6-213ENST00000636212 PAGR1Q9BTK6 254 aa22.77■■□□□ 1.24
CLN6-213ENST00000636212 PUS7LQ9H0K6 701 aaKnown RBP22.77■■□□□ 1.24
CLN6-213ENST00000636212 SH2D4AQ9H788 454 aa22.77■■□□□ 1.24
CLN6-213ENST00000636212 USP17L12C9JPN9 530 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 USP17L21D6R901 530 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 GJB1P08034 283 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 MAPK4P31152 587 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 C12orf60Q5U649 245 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 TSHZ3Q63HK5 1081 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 ACER1Q8TDN7 264 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 APPBP2Q92624 585 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 DYNLL2Q96FJ2 89 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 CCDC17Q96LX7 622 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 CRBNQ96SW2 442 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 ARHGEF10LQ9HCE6 1279 aa22.76■■□□□ 1.23
CLN6-213ENST00000636212 ARPP21Q9UBL0 812 aaPredicted RBP22.76■■□□□ 1.23
CLN6-213ENST00000636212 RNF113AO15541 343 aaKnown RBP22.75■■□□□ 1.23
CLN6-213ENST00000636212 GLRX3O76003 335 aaKnown RBP22.75■■□□□ 1.23
CLN6-213ENST00000636212 INHAP05111 366 aa22.75■■□□□ 1.23
CLN6-213ENST00000636212 CAPN2P17655 700 aa22.75■■□□□ 1.23
CLN6-213ENST00000636212 VCAM1P19320 739 aa22.75■■□□□ 1.23
CLN6-213ENST00000636212 ERVK-9P63128 1117 aa22.75■■□□□ 1.23
CLN6-213ENST00000636212 ERVK-24P63145 666 aa22.75■■□□□ 1.23
CLN6-213ENST00000636212 CCNA1P78396 465 aa22.75■■□□□ 1.23
CLN6-213ENST00000636212 CHGBP05060 677 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 GUCY1A2P33402 732 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 GJA8P48165 433 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 CATSPERGQ6ZRH7 1159 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 SLC44A5Q8NCS7 719 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 SOCS4Q8WXH5 440 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 NUDT12Q9BQG2 462 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 RBPJLQ9UBG7 517 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 RABGAP1Q9Y3P9 1069 aa22.74■■□□□ 1.23
CLN6-213ENST00000636212 GNAT2P19087 354 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 CDK8P49336 464 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 EVX2Q03828 476 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 AAMPQ13685 434 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 C16orf86Q6ZW13 317 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 GCC1Q96CN9 775 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 STRBPQ96SI9 672 aaKnown RBP22.73■■□□□ 1.23
CLN6-213ENST00000636212 UNC93B1Q9H1C4 597 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 RPAP3Q9H6T3 665 aaPredicted RBP22.73■■□□□ 1.23
CLN6-213ENST00000636212 TXNRD2Q9NNW7 524 aa22.73■■□□□ 1.23
CLN6-213ENST00000636212 KIAA0100Q14667 2235 aaKnown RBP22.73■■□□□ 1.23
CLN6-213ENST00000636212 HMGCRP04035 888 aa22.72■■□□□ 1.23
CLN6-213ENST00000636212 MX1P20591 662 aa22.72■■□□□ 1.23
CLN6-213ENST00000636212 ICA1Q05084 483 aa22.72■■□□□ 1.23
CLN6-213ENST00000636212 ANKRD45Q5TZF3 282 aa22.72■■□□□ 1.23
CLN6-213ENST00000636212 GIMAP6Q6P9H5 292 aa22.72■■□□□ 1.23
CLN6-213ENST00000636212 CTR9Q6PD62 1173 aa22.72■■□□□ 1.23
CLN6-213ENST00000636212 MYH8P13535 1937 aa22.72■■□□□ 1.23
CLN6-213ENST00000636212 BAZ2AQ9UIF9 1905 aaKnown RBP22.71■■□□□ 1.23
CLN6-213ENST00000636212 CYP2D7A0A087X1C5 515 aa22.71■■□□□ 1.23
CLN6-213ENST00000636212 APPP05067 770 aa22.71■■□□□ 1.23
CLN6-213ENST00000636212 AKR1B1P15121 316 aa22.71■■□□□ 1.23
CLN6-213ENST00000636212 TRMT44Q8IYL2 757 aaKnown RBP22.71■■□□□ 1.23
CLN6-213ENST00000636212 U2AF1L4Q8WU68 220 aaKnown RBP22.71■■□□□ 1.23
CLN6-213ENST00000636212 FSD1Q9BTV5 496 aa22.71■■□□□ 1.23
CLN6-213ENST00000636212 TANGO6Q9C0B7 1094 aa22.71■■□□□ 1.23
CLN6-213ENST00000636212 GJD2Q9UKL4 321 aa22.71■■□□□ 1.23
CLN6-213ENST00000636212 PDE4DIPQ5VU43 2346 aa22.71■■□□□ 1.23
CLN6-213ENST00000636212 SGPL1O95470 568 aa22.7■■□□□ 1.22
CLN6-213ENST00000636212 PLEKHH3Q7Z736 793 aa22.7■■□□□ 1.22
CLN6-213ENST00000636212 LPAR1Q92633 364 aa22.7■■□□□ 1.22
CLN6-213ENST00000636212 OSBP2Q969R2 916 aa22.7■■□□□ 1.22
CLN6-213ENST00000636212 HOXC10Q9NYD6 342 aa22.7■■□□□ 1.22
CLN6-213ENST00000636212 CENPFP49454 3210 aa22.7■■□□□ 1.22
CLN6-213ENST00000636212 A0A1W2PRG0 241 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 GPAA1O43292 621 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 PEX10O60683 326 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 TFRCP02786 760 aaKnown RBP22.69■■□□□ 1.22
CLN6-213ENST00000636212 CYP2B6P20813 491 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 RGS2P41220 211 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 TDO2P48775 406 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 ATP2B2Q01814 1243 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 COG2Q14746 738 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 Q3C1V9 767 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 SBK1Q52WX2 424 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 WDR78Q5VTH9 848 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 LBX2Q6XYB7 198 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 GPR142Q7Z601 462 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 SHISA4Q96DD7 197 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 MKNK2Q9HBH9 465 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 ZNF287Q9HBT7 754 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 IVNS1ABPQ9Y6Y0 642 aa22.69■■□□□ 1.22
CLN6-213ENST00000636212 GSG1L2A8MUP6 293 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 MINDY4BA8MYZ0 360 aa22.68■■□□□ 1.22
CLN6-213ENST00000636212 XRCC5P13010 732 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms