RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 IL17RBQ9NRM6 502 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 TCP11L1Q9NUJ3 509 aa22.74■■□□□ 1.23
TREX1-205ENST00000625293 TFAP4Q01664 338 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 FAM160A1Q05DH4 1040 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 DGKHQ86XP1 1220 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 SHISA4Q96DD7 197 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 MAP3K14Q99558 947 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 PTPAQ15257 358 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 CCDC73Q6ZRK6 1079 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 NOSTRINQ8IVI9 506 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 FSIP1Q8NA03 581 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 MRPS27Q92552 414 aaKnown RBP22.73■■□□□ 1.23
TREX1-205ENST00000625293 FOXP1Q9H334 677 aaPredicted RBP22.73■■□□□ 1.23
TREX1-205ENST00000625293 KCNJ14Q9UNX9 436 aa22.73■■□□□ 1.23
TREX1-205ENST00000625293 TYRO3Q06418 890 aa22.72■■□□□ 1.23
TREX1-205ENST00000625293 AXDND1Q5T1B0 1012 aaPredicted RBP22.72■■□□□ 1.23
TREX1-205ENST00000625293 DIS3L2Q8IYB7 885 aaKnown RBP22.72■■□□□ 1.23
TREX1-205ENST00000625293 EYA3Q99504 573 aa22.72■■□□□ 1.23
TREX1-205ENST00000625293 SAP30BPQ9UHR5 308 aaKnown RBP22.72■■□□□ 1.23
TREX1-205ENST00000625293 MRVI1Q9Y6F6 885 aa22.72■■□□□ 1.23
TREX1-205ENST00000625293 BTBD18B2RXH4 712 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 GNL2Q13823 731 aaKnown RBP22.71■■□□□ 1.23
TREX1-205ENST00000625293 SF3A1Q15459 793 aaKnown RBP22.71■■□□□ 1.23
TREX1-205ENST00000625293 C16orf86Q6ZW13 317 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 CKAP2LQ8IYA6 745 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 FMR1NBQ8N0W7 255 aaPredicted RBP22.71■■□□□ 1.23
TREX1-205ENST00000625293 FAM43AQ8N2R8 423 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 SNED1Q8TER0 1413 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 CNTNAP5Q8WYK1 1306 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 RASA1P20936 1047 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 SAFBQ15424 915 aaKnown RBP eCLIP22.71■■□□□ 1.23
TREX1-205ENST00000625293 DOK7Q18PE1 504 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 CCDC178Q5BJE1 867 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 C9orf131Q5VYM1 1079 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 SLC44A5Q8NCS7 719 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 CTCFLQ8NI51 663 aaPredicted RBP22.71■■□□□ 1.23
TREX1-205ENST00000625293 TMX4Q9H1E5 349 aaPredicted RBP22.71■■□□□ 1.23
TREX1-205ENST00000625293 MKNK2Q9HBH9 465 aa22.71■■□□□ 1.23
TREX1-205ENST00000625293 CTAGE5O15320 804 aa22.7■■□□□ 1.22
TREX1-205ENST00000625293 PPP6R2O75170 966 aa22.7■■□□□ 1.22
TREX1-205ENST00000625293 SRBD1Q8N5C6 995 aaKnown RBP22.7■■□□□ 1.22
TREX1-205ENST00000625293 FOCADQ5VW36 1801 aa22.69■■□□□ 1.22
TREX1-205ENST00000625293 AKAP17AQ02040 695 aaKnown RBP22.69■■□□□ 1.22
TREX1-205ENST00000625293 WDHD1O75717 1129 aaPredicted RBP22.68■■□□□ 1.22
TREX1-205ENST00000625293 PHF20Q9BVI0 1012 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 ZNF287Q9HBT7 754 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.68■■□□□ 1.22
TREX1-205ENST00000625293 V9GY48 417 aaPredicted RBP22.68■■□□□ 1.22
TREX1-205ENST00000625293 USP17L3A6NCW0 530 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 USP17L4A6NCW7 530 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 CDK8P49336 464 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 TOB1P50616 345 aaPredicted RBP22.68■■□□□ 1.22
TREX1-205ENST00000625293 USP17L1Q7RTZ2 530 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 PODNQ7Z5L7 613 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 ZNF444Q8N0Y2 327 aaPredicted RBP22.68■■□□□ 1.22
TREX1-205ENST00000625293 KAT14Q9H8E8 782 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 RNF181Q9P0P0 153 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 TAOK2Q9UL54 1235 aa22.68■■□□□ 1.22
TREX1-205ENST00000625293 KINO60870 393 aaKnown RBP22.67■■□□□ 1.22
TREX1-205ENST00000625293 TSPY3P0CV98 308 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 TSPY8P0CW00 308 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 CMA1P23946 247 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 NDUFA8P51970 172 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 FAM200AQ8TCP9 573 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 OXER1Q8TDS5 423 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 TRIM44Q96DX7 344 aaPredicted RBP22.67■■□□□ 1.22
TREX1-205ENST00000625293 MXD3Q9BW11 206 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 VPS54Q9P1Q0 977 aa22.67■■□□□ 1.22
TREX1-205ENST00000625293 TTF2Q9UNY4 1162 aaKnown RBP22.67■■□□□ 1.22
TREX1-205ENST00000625293 FAM237AA0A1B0GTK4 181 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 A0A1B0GVL5 298 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 XBP1P17861 261 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 NR5A1Q13285 461 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 CCDC93Q567U6 631 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 PNMA1Q8ND90 353 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 FBXW7Q969H0 707 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 KIF5BP33176 963 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 GRM4Q14833 912 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 RILPL1Q5EBL4 403 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 HHIPL2Q6UWX4 724 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 JMYQ8N9B5 988 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 NEDD1Q8NHV4 660 aa22.66■■□□□ 1.22
TREX1-205ENST00000625293 SBF1O95248 1867 aa22.65■■□□□ 1.22
TREX1-205ENST00000625293 hCG_1642624A0A1W2PR95 340 aa22.65■■□□□ 1.22
TREX1-205ENST00000625293 F8W031 263 aaPredicted RBP22.65■■□□□ 1.22
TREX1-205ENST00000625293 MARCKSP29966 332 aaPredicted RBP22.65■■□□□ 1.22
TREX1-205ENST00000625293 NOVP48745 357 aa22.65■■□□□ 1.22
TREX1-205ENST00000625293 FKBP1AP62942 108 aaKnown RBP22.65■■□□□ 1.22
TREX1-205ENST00000625293 NPY5RQ15761 445 aa22.65■■□□□ 1.22
TREX1-205ENST00000625293 HS1BP3Q53T59 392 aa22.65■■□□□ 1.22
TREX1-205ENST00000625293 ZNF784Q8NCA9 323 aaPredicted RBP22.65■■□□□ 1.22
TREX1-205ENST00000625293 ZNF526Q8TF50 670 aaPredicted RBP22.65■■□□□ 1.22
TREX1-205ENST00000625293 ZNF277Q9NRM2 450 aaPredicted RBP22.65■■□□□ 1.22
TREX1-205ENST00000625293 FER1L6Q2WGJ9 1857 aa22.64■■□□□ 1.22
TREX1-205ENST00000625293 MYH6P13533 1939 aa22.64■■□□□ 1.22
TREX1-205ENST00000625293 GABPAQ06546 454 aa22.64■■□□□ 1.22
TREX1-205ENST00000625293 SASS6Q6UVJ0 657 aa22.64■■□□□ 1.22
TREX1-205ENST00000625293 TAOK3Q9H2K8 898 aa22.64■■□□□ 1.22
TREX1-205ENST00000625293 RRAGDQ9NQL2 400 aaPredicted RBP22.64■■□□□ 1.22
TREX1-205ENST00000625293 HPSEQ9Y251 543 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms