RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 GOLGA8QA0A0J9YX86 632 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 GOLGA8OA6NCC3 632 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 GOLGA8NF8WBI6 632 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 CEBPAP49715 358 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 HSPA2P54652 639 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 GUCY1B3Q02153 619 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 RAD51Q06609 339 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC124Q96CT7 223 aaKnown RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 DCAF5Q96JK2 942 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 ABI2Q9NYB9 513 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 PREPLQ4J6C6 727 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC102BQ68D86 513 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 ZSCAN32Q9NX65 697 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 IPPQ9Y573 584 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 ARMC6Q6NXE6 501 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 DTNBP1Q96EV8 351 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 KLHL3Q9UH77 587 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 TESPA1A2RU30 521 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 BCRP11274 1271 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 KRT2P35908 639 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 RASGRF1Q13972 1273 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 KRT81Q14533 505 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 VCX3AQ9NNX9 186 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 CIB2O75838 187 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 CCDC157Q569K6 752 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 ANKS3Q6ZW76 656 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 UBL4BQ8N7F7 174 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 TRIM62Q9BVG3 475 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.95□□□□□ -1.3
CDKL5-205ENST00000623535 MEI4A8MW99 385 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 TMC2Q8TDI7 906 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 SEPT8Q92599 483 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 JADE2Q9NQC1 790 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 PHLPP2Q6ZVD8 1323 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 TACC1O75410 805 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 GSTA1P08263 222 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 GSTA2P09210 222 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 SNX25Q9H3E2 840 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 FLOT1O75955 427 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 MX1P20591 662 aa6.95□□□□□ -1.3
CDKL5-205ENST00000623535 ARHGAP25P42331 645 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 USHBP1Q8N6Y0 703 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 RNF217Q8TC41 542 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 DACT3Q96B18 629 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SDCCAG3Q96C92 435 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 NDEL1Q9GZM8 345 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SELENONQ9NZV5 590 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 KRT87PA6NCN2 255 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 CASQ2O14958 399 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 ZNF263O14978 683 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 ST8SIA6P61647 398 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 EHD2Q9NZN4 543 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 FAM47E-STBD1D6RA91 191 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 CHMP2AO43633 222 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 CYP26C1Q6V0L0 522 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 ARMCX2Q7L311 632 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 IVLP07476 585 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 DMP1Q13316 513 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 USP16Q9Y5T5 823 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SMCO2A6NFE2 343 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 RNF8O76064 485 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 TNNC1P63316 161 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 BTBD8Q5XKL5 378 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 POMGNT1Q8WZA1 660 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SETD1BQ9UPS6 1966 aaKnown RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 TMEM110-MUSTN1A8MSY1 372 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 TFRCP02786 760 aaKnown RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 ARPP19P56211 112 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 NR1H3Q13133 447 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SESTD1Q86VW0 696 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 RPF1Q9H9Y2 349 aaKnown RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 OOSP2Q86WS3 158 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 PDCL2Q8N4E4 241 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 VCX3BQ9H321 246 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 ZFYVE28Q9HCC9 887 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 CLCA2Q9UQC9 943 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SH3TC1Q8TE82 1336 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 Q3C1V9 767 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 DTHD1Q6ZMT9 781 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 TSEN34Q9BSV6 310 aaKnown RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SYTL2Q9HCH5 934 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SMARCA5O60264 1052 aaPredicted RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SV2BQ7L1I2 683 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 SUPT6HQ7KZ85 1726 aaKnown RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 ALDH1A2O94788 518 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 PTPAQ15257 358 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 ARL8AQ96BM9 186 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 TSGA10Q9BZW7 698 aa6.94□□□□□ -1.3
CDKL5-205ENST00000623535 CDV3Q9UKY7 258 aaKnown RBP6.94□□□□□ -1.3
CDKL5-205ENST00000623535 MYO1EQ12965 1108 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 EXOSC9Q06265 439 aaKnown RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 DCAF17Q5H9S7 520 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 CACNA2D3Q8IZS8 1091 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 NBPF15Q8N660 670 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 GOLGA5Q8TBA6 731 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 DDX27Q96GQ7 796 aaKnown RBP6.93□□□□□ -1.3
CDKL5-205ENST00000623535 NUP85Q9BW27 656 aa6.93□□□□□ -1.3
CDKL5-205ENST00000623535 CYBBP04839 570 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms