RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 DHX40Q8IX18 779 aaKnown RBP18.1■□□□□ 0.49
NR1H3-235ENST00000616973 ZNF579Q8NAF0 562 aaKnown RBP18.1■□□□□ 0.49
NR1H3-235ENST00000616973 TAOK2Q9UL54 1235 aa18.1■□□□□ 0.49
NR1H3-235ENST00000616973 CDC25BP30305 580 aa18.09■□□□□ 0.49
NR1H3-235ENST00000616973 KIF5BP33176 963 aa18.09■□□□□ 0.49
NR1H3-235ENST00000616973 OXER1Q8TDS5 423 aa18.09■□□□□ 0.49
NR1H3-235ENST00000616973 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
NR1H3-235ENST00000616973 TRIM5Q9C035 493 aa18.09■□□□□ 0.49
NR1H3-235ENST00000616973 FBXO2Q9UK22 296 aaPredicted RBP18.09■□□□□ 0.49
NR1H3-235ENST00000616973 ATP6V0A2Q9Y487 856 aa18.09■□□□□ 0.49
NR1H3-235ENST00000616973 GAKO14976 1311 aa18.09■□□□□ 0.49
NR1H3-235ENST00000616973 BTDP43251 543 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 NLRP12P59046 1061 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 TFAP4Q01664 338 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 SRBD1Q8N5C6 995 aaKnown RBP18.08■□□□□ 0.49
NR1H3-235ENST00000616973 TGFBRAP1Q8WUH2 860 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 CLIC6Q96NY7 704 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 IL17RBQ9NRM6 502 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 VPS54Q9P1Q0 977 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 TUBE1Q9UJT0 475 aa18.08■□□□□ 0.49
NR1H3-235ENST00000616973 COL11A2P13942 1736 aaPredicted RBP18.08■□□□□ 0.48
NR1H3-235ENST00000616973 RGPD3A6NKT7 1758 aaPredicted RBP18.08■□□□□ 0.48
NR1H3-235ENST00000616973 RGPD4Q7Z3J3 1758 aa18.08■□□□□ 0.48
NR1H3-235ENST00000616973 BECN2A8MW95 431 aa18.08■□□□□ 0.48
NR1H3-235ENST00000616973 ZRSR1Q15695 479 aaKnown RBP18.08■□□□□ 0.48
NR1H3-235ENST00000616973 ZNF827Q17R98 1081 aa18.08■□□□□ 0.48
NR1H3-235ENST00000616973 FLAD1Q8NFF5 587 aa18.08■□□□□ 0.48
NR1H3-235ENST00000616973 ZNF287Q9HBT7 754 aa18.08■□□□□ 0.48
NR1H3-235ENST00000616973 BRMS1Q9HCU9 246 aa18.08■□□□□ 0.48
NR1H3-235ENST00000616973 MFSD14BQ5SR56 506 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 PIBF1Q8WXW3 757 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 DYNLL2Q96FJ2 89 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 KAT14Q9H8E8 782 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 MKNK2Q9HBH9 465 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 CABP5Q9NP86 173 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 SUGT1Q9Y2Z0 365 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 PCDHB6Q9Y5E3 794 aa18.07■□□□□ 0.48
NR1H3-235ENST00000616973 SRPRBQ9Y5M8 271 aaKnown RBP18.07■□□□□ 0.48
NR1H3-235ENST00000616973 C6orf229H3BNL8 230 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 COL23A1Q86Y22 540 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-235ENST00000616973 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-235ENST00000616973 TNFRSF25Q93038 417 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 MRFAP1L1Q96HT8 127 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 COA1Q9GZY4 146 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 TTC12Q9H892 705 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-235ENST00000616973 FAM13BQ9NYF5 915 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 KCNH3Q9ULD8 1083 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 MYH8P13535 1937 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 BMP15O95972 392 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 SRGNP10124 158 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 SCG2P13521 617 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 NPR1P16066 1061 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 NPY5RQ15761 445 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-235ENST00000616973 ZNF772Q68DY9 489 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-235ENST00000616973 KRBA2Q6ZNG9 492 aa18.06■□□□□ 0.48
NR1H3-235ENST00000616973 ZNF444Q8N0Y2 327 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-235ENST00000616973 ZNF830Q96NB3 372 aaPredicted RBP18.06■□□□□ 0.48
NR1H3-235ENST00000616973 GNAQP50148 359 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 PLCD1P51178 756 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 RHBDL3P58872 404 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 GRM4Q14833 912 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 DPCR1Q3MIW9 517 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 C16orf86Q6ZW13 317 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 MAPKAPK5Q8IW41 473 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 TEX11Q8IYF3 940 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 SPC24Q8NBT2 197 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 PNMA1Q8ND90 353 aa18.05■□□□□ 0.48
NR1H3-235ENST00000616973 TRIM75PA6NK02 468 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 TSPY3P0CV98 308 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 TSPY8P0CW00 308 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 RASA1P20936 1047 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 ALDH1B1P30837 517 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 MPNDQ8N594 471 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 AOPEPQ8N6M6 819 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 SH3GLB2Q9NR46 395 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 TNS1Q9HBL0 1735 aaKnown RBP18.04■□□□□ 0.48
NR1H3-235ENST00000616973 SNED1Q8TER0 1413 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 BAZ2BQ9UIF8 2168 aaKnown RBP18.04■□□□□ 0.48
NR1H3-235ENST00000616973 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.04■□□□□ 0.48
NR1H3-235ENST00000616973 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 PDE6BP35913 854 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
NR1H3-235ENST00000616973 FLT1P17948 1338 aa18.03■□□□□ 0.48
NR1H3-235ENST00000616973 A0A087WWV3 80 aa18.03■□□□□ 0.48
NR1H3-235ENST00000616973 TERF1P54274 439 aa18.03■□□□□ 0.48
NR1H3-235ENST00000616973 SLC4A8Q2Y0W8 1093 aa18.03■□□□□ 0.48
NR1H3-235ENST00000616973 LONRF3Q496Y0 759 aa18.03■□□□□ 0.48
NR1H3-235ENST00000616973 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
NR1H3-235ENST00000616973 TRAPPC10P48553 1259 aa18.02■□□□□ 0.48
NR1H3-235ENST00000616973 CDK8P49336 464 aa18.02■□□□□ 0.48
NR1H3-235ENST00000616973 MDM2Q00987 491 aaPredicted RBP18.02■□□□□ 0.48
NR1H3-235ENST00000616973 METTL16Q86W50 562 aaKnown RBP18.02■□□□□ 0.48
NR1H3-235ENST00000616973 FAM177A1Q8N128 213 aaPredicted RBP18.02■□□□□ 0.48
NR1H3-235ENST00000616973 CNNM3Q8NE01 707 aa18.02■□□□□ 0.48
NR1H3-235ENST00000616973 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.48
NR1H3-235ENST00000616973 SAP30BPQ9UHR5 308 aaKnown RBP18.02■□□□□ 0.48
NR1H3-235ENST00000616973 SMTNL1A8MU46 457 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 IKBKBO14920 756 aa18.02■□□□□ 0.47
NR1H3-235ENST00000616973 APBA3O96018 575 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms