RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 CEP95Q96GE4 821 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 TMEM47Q9BQJ4 181 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 PCDHB6Q9Y5E3 794 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 PDS5AQ29RF7 1337 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 WNT7AO00755 349 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 ORC4O43929 436 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 DEXIO95424 95 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 PDIA4P13667 645 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 AKR1B1P15121 316 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 NLRP5P59047 1200 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 RBM26Q5T8P6 1007 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 APOBEC3HQ6NTF7 200 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 LUZP1Q86V48 1076 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 SLF2Q8IX21 1173 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 LARGE2Q8N3Y3 721 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 DNAJC25Q9H1X3 360 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 CLIP2Q9UDT6 1046 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 YDJCA8MPS7 323 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 TCP10L2B9ZVM9 353 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 KINO60870 393 aaKnown RBP3.96□□□□□ -1.77
LIG4-205ENST00000614526 MMP1P03956 469 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 FGRP09769 529 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 TOB1P50616 345 aaPredicted RBP3.96□□□□□ -1.77
LIG4-205ENST00000614526 TYRO3Q06418 890 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 ZNF174Q15697 407 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 ANO6Q4KMQ2 910 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 TMTC3Q6ZXV5 915 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 TMC4Q7Z404 712 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 HEATR3Q7Z4Q2 680 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 PODNQ7Z5L7 613 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 NOSTRINQ8IVI9 506 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 TTLL6Q8N841 843 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 FBXO41Q8TF61 875 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 PRMT6Q96LA8 375 aaPredicted RBP3.96□□□□□ -1.77
LIG4-205ENST00000614526 UIMC1Q96RL1 719 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 GPCPD1Q9NPB8 672 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 RTEL1Q9NZ71 1219 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 CHD4Q14839 1912 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 ELP1O95163 1332 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 FAM205AQ6ZU69 1335 aa3.96□□□□□ -1.77
LIG4-205ENST00000614526 DOCK2Q92608 1830 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 DDTLA6NHG4 134 aaPredicted RBP3.96□□□□□ -1.78
LIG4-205ENST00000614526 USP17L5A8MUK1 530 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 GDF11O95390 407 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 PLCG2P16885 1265 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 SLC16A2P36021 539 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 FUT2Q10981 343 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 DACT2Q5SW24 774 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 STYK1Q6J9G0 422 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 SASS6Q6UVJ0 657 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 PIK3AP1Q6ZUJ8 805 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 BRAPQ7Z569 592 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 WASF1Q92558 559 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 ZNF830Q96NB3 372 aaPredicted RBP3.96□□□□□ -1.78
LIG4-205ENST00000614526 SHTN1A0MZ66 631 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 KLRF2D3W0D1 207 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 CYTH3O43739 400 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 PTMAP06454 111 aaKnown RBP3.96□□□□□ -1.78
LIG4-205ENST00000614526 CCDC192P0DO97 292 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 HMGB2P26583 209 aaKnown RBP3.96□□□□□ -1.78
LIG4-205ENST00000614526 SNW1Q13573 536 aaKnown RBP3.96□□□□□ -1.78
LIG4-205ENST00000614526 ZRSR1Q15695 479 aaKnown RBP3.96□□□□□ -1.78
LIG4-205ENST00000614526 SLC35G1Q2M3R5 365 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 TYW1BQ6NUM6 668 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 USP49Q70CQ1 688 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 SPC24Q8NBT2 197 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 C7orf43Q8WVR3 580 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 MRPS27Q92552 414 aaKnown RBP3.96□□□□□ -1.78
LIG4-205ENST00000614526 CLSTN2Q9H4D0 955 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 VEZTQ9HBM0 779 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 BCS1LQ9Y276 419 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 GAKO14976 1311 aa3.96□□□□□ -1.78
LIG4-205ENST00000614526 PSMD14O00487 310 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 PRPF3O43395 683 aaKnown RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 PFKFB1P16118 471 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 XBP1P17861 261 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 U2AF2P26368 475 aaKnown RBP eCLIP3.95□□□□□ -1.78
LIG4-205ENST00000614526 CDC25AP30304 524 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SNAP25P60880 206 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SLC39A14Q15043 492 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CFAP100Q494V2 611 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ADALQ6DHV7 355 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 C16orf86Q6ZW13 317 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CDAN1Q8IWY9 1227 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 KCNG4Q8TDN1 519 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 FAM163AQ96GL9 167 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 RNF26Q9BY78 433 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 OSBPL5Q9H0X9 879 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 RRAGDQ9NQL2 400 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 DDX19AQ9NUU7 478 aaKnown RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 POLR3EQ9NVU0 708 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.95□□□□□ -1.78
LIG4-205ENST00000614526 MAD2L2Q9UI95 211 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SERPINB13Q9UIV8 391 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 CNTNAP5Q8WYK1 1306 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 A0A1B0GUL6 1792 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 SLX4Q8IY92 1834 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 ANKRD31Q8N7Z5 1873 aa3.95□□□□□ -1.78
LIG4-205ENST00000614526 FOXN1O15353 648 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms