RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 PXYLP1Q8TE99 480 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 CCDC17Q96LX7 622 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 STRBPQ96SI9 672 aaKnown RBP21.88■■□□□ 1.09
VCX3A-203ENST00000612369 PDE4DIPQ5VU43 2346 aa21.88■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L15C9J2P7 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L13C9JLJ4 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L11C9JVI0 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L18D6R9N7 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L22D6RA61 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L17D6RBQ6 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L19D6RCP7 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L20D6RJB6 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 MPHOSPH10O00566 681 aaKnown RBP21.87■■□□□ 1.09
VCX3A-203ENST00000612369 MX1P20591 662 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 UBXN2AP68543 259 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 EVX2Q03828 476 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 USP17L24Q0WX57 530 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 SEPT2Q15019 361 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 GIMAP6Q6P9H5 292 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 PI4K2BQ8TCG2 481 aa21.87■■□□□ 1.09
VCX3A-203ENST00000612369 ARPP21Q9UBL0 812 aaPredicted RBP21.87■■□□□ 1.09
VCX3A-203ENST00000612369 BAZ2AQ9UIF9 1905 aaKnown RBP21.86■■□□□ 1.09
VCX3A-203ENST00000612369 ADCY3O60266 1144 aa21.86■■□□□ 1.09
VCX3A-203ENST00000612369 EN2P19622 333 aaPredicted RBP21.86■■□□□ 1.09
VCX3A-203ENST00000612369 C16orf86Q6ZW13 317 aa21.86■■□□□ 1.09
VCX3A-203ENST00000612369 GPRC5AQ8NFJ5 357 aa21.86■■□□□ 1.09
VCX3A-203ENST00000612369 ACER1Q8TDN7 264 aa21.86■■□□□ 1.09
VCX3A-203ENST00000612369 DYNLL2Q96FJ2 89 aa21.86■■□□□ 1.09
VCX3A-203ENST00000612369 BIN2Q9UBW5 565 aaPredicted RBP21.86■■□□□ 1.09
VCX3A-203ENST00000612369 GNAT2P19087 354 aa21.85■■□□□ 1.09
VCX3A-203ENST00000612369 CDK8P49336 464 aa21.85■■□□□ 1.09
VCX3A-203ENST00000612369 ZYXQ15942 572 aaKnown RBP21.85■■□□□ 1.09
VCX3A-203ENST00000612369 ANKRD45Q5TZF3 282 aa21.85■■□□□ 1.09
VCX3A-203ENST00000612369 CTR9Q6PD62 1173 aa21.85■■□□□ 1.09
VCX3A-203ENST00000612369 CATSPERGQ6ZRH7 1159 aa21.85■■□□□ 1.09
VCX3A-203ENST00000612369 OSBP2Q969R2 916 aa21.85■■□□□ 1.09
VCX3A-203ENST00000612369 RBPJLQ9UBG7 517 aa21.85■■□□□ 1.09
VCX3A-203ENST00000612369 MYH8P13535 1937 aa21.84■■□□□ 1.09
VCX3A-203ENST00000612369 SALL3Q9BXA9 1300 aa21.84■■□□□ 1.09
VCX3A-203ENST00000612369 BRCA2P51587 3418 aa21.84■■□□□ 1.09
VCX3A-203ENST00000612369 VCAM1P19320 739 aa21.84■■□□□ 1.09
VCX3A-203ENST00000612369 SBK1Q52WX2 424 aa21.84■■□□□ 1.09
VCX3A-203ENST00000612369 SLC44A5Q8NCS7 719 aa21.84■■□□□ 1.09
VCX3A-203ENST00000612369 NKX2-3Q8TAU0 364 aa21.84■■□□□ 1.09
VCX3A-203ENST00000612369 OTUD7AQ8TE49 926 aaPredicted RBP21.84■■□□□ 1.09
VCX3A-203ENST00000612369 CYP2D7A0A087X1C5 515 aa21.83■■□□□ 1.09
VCX3A-203ENST00000612369 GSG1L2A8MUP6 293 aa21.83■■□□□ 1.09
VCX3A-203ENST00000612369 MYCP01106 439 aaPredicted RBP21.83■■□□□ 1.09
VCX3A-203ENST00000612369 MTFR1Q15390 333 aa21.83■■□□□ 1.09
VCX3A-203ENST00000612369 LBX2Q6XYB7 198 aa21.83■■□□□ 1.09
VCX3A-203ENST00000612369 SH2D4AQ9H788 454 aa21.83■■□□□ 1.09
VCX3A-203ENST00000612369 RABGAP1Q9Y3P9 1069 aa21.83■■□□□ 1.09
VCX3A-203ENST00000612369 DOCK3Q8IZD9 2030 aa21.83■■□□□ 1.09
VCX3A-203ENST00000612369 GPAA1O43292 621 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 CCL5P13501 91 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 AKR1B1P15121 316 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 CAPN2P17655 700 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 MAPK4P31152 587 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 ERVK-9P63128 1117 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 ERVK-24P63145 666 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 ARHGEF10LQ9HCE6 1279 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 TXNRD2Q9NNW7 524 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 STAP2Q9UGK3 403 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 GJD2Q9UKL4 321 aa21.82■■□□□ 1.08
VCX3A-203ENST00000612369 A0A1W2PRG0 241 aa21.81■■□□□ 1.08
VCX3A-203ENST00000612369 GJB1P08034 283 aa21.81■■□□□ 1.08
VCX3A-203ENST00000612369 CCAR1Q8IX12 1150 aaKnown RBP21.81■■□□□ 1.08
VCX3A-203ENST00000612369 FSD1Q9BTV5 496 aa21.81■■□□□ 1.08
VCX3A-203ENST00000612369 RNF208Q9H0X6 261 aa21.81■■□□□ 1.08
VCX3A-203ENST00000612369 RWDD1Q9H446 243 aaPredicted RBP21.81■■□□□ 1.08
VCX3A-203ENST00000612369 ELNP15502 786 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 CCNA1P78396 465 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 ICA1Q05084 483 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 PRPF38BQ5VTL8 546 aaKnown RBP21.8■■□□□ 1.08
VCX3A-203ENST00000612369 SOCS4Q8WXH5 440 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 LPAR1Q92633 364 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 PAGR1Q9BTK6 254 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 RPAP3Q9H6T3 665 aaPredicted RBP21.8■■□□□ 1.08
VCX3A-203ENST00000612369 KANSL2Q9H9L4 492 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 TMX2Q9Y320 296 aa21.8■■□□□ 1.08
VCX3A-203ENST00000612369 PATL2C9JE40 543 aaKnown RBP21.79■■□□□ 1.08
VCX3A-203ENST00000612369 INHAP05111 366 aa21.79■■□□□ 1.08
VCX3A-203ENST00000612369 GJA8P48165 433 aa21.79■■□□□ 1.08
VCX3A-203ENST00000612369 Q3C1V9 767 aa21.79■■□□□ 1.08
VCX3A-203ENST00000612369 TICAM2Q86XR7 235 aa21.79■■□□□ 1.08
VCX3A-203ENST00000612369 NUDT12Q9BQG2 462 aa21.79■■□□□ 1.08
VCX3A-203ENST00000612369 HOXC10Q9NYD6 342 aa21.79■■□□□ 1.08
VCX3A-203ENST00000612369 ROBO3Q96MS0 1386 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 SMIM22K7EJ46 135 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 M0R2C6 588 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 APPP05067 770 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 PDE1AP54750 535 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 COG2Q14746 738 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 ZMYM1Q5SVZ6 1142 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 POTEEQ6S8J3 1075 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 SIAH1Q8IUQ4 282 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 SMC5Q8IY18 1101 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 EVI5LQ96CN4 794 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 NACAP1Q9BZK3 213 aa21.78■■□□□ 1.08
VCX3A-203ENST00000612369 ZNF287Q9HBT7 754 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms