RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TRIB2Q92519 343 aa21.55■■□□□ 1.04
SSBP1-215ENST00000612337 DNAJC2Q99543 621 aaKnown RBP21.55■■□□□ 1.04
SSBP1-215ENST00000612337 KIAA1683Q9H0B3 1180 aa21.55■■□□□ 1.04
SSBP1-215ENST00000612337 CHMP4BQ9H444 224 aaKnown RBP21.55■■□□□ 1.04
SSBP1-215ENST00000612337 HMX1Q9NP08 348 aaPredicted RBP21.55■■□□□ 1.04
SSBP1-215ENST00000612337 CABP5Q9NP86 173 aa21.55■■□□□ 1.04
SSBP1-215ENST00000612337 ZNF532Q9HCE3 1301 aa21.55■■□□□ 1.04
SSBP1-215ENST00000612337 TCRBV5S4A2TA0A5A2 114 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L15C9J2P7 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L13C9JLJ4 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L11C9JVI0 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L18D6R9N7 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L22D6RA61 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L17D6RBQ6 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L19D6RCP7 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L20D6RJB6 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 GABPAQ06546 454 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 USP17L24Q0WX57 530 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 PDE3AQ14432 1141 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 POTEEQ6S8J3 1075 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 ANKLE1Q8NAG6 615 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 PAWRQ96IZ0 340 aaKnown RBP21.54■■□□□ 1.04
SSBP1-215ENST00000612337 PAGR1Q9BTK6 254 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 PORCNQ9H237 461 aa21.54■■□□□ 1.04
SSBP1-215ENST00000612337 ZYXQ15942 572 aaKnown RBP21.53■■□□□ 1.04
SSBP1-215ENST00000612337 MAP3K21Q5TCX8 1036 aa21.53■■□□□ 1.04
SSBP1-215ENST00000612337 GPR142Q7Z601 462 aa21.53■■□□□ 1.04
SSBP1-215ENST00000612337 NECAB2Q7Z6G3 386 aa21.53■■□□□ 1.04
SSBP1-215ENST00000612337 CCAR1Q8IX12 1150 aaKnown RBP21.53■■□□□ 1.04
SSBP1-215ENST00000612337 TRMT44Q8IYL2 757 aaKnown RBP21.53■■□□□ 1.04
SSBP1-215ENST00000612337 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
SSBP1-215ENST00000612337 USP6NLQ92738 828 aa21.53■■□□□ 1.04
SSBP1-215ENST00000612337 MCM9Q9NXL9 1143 aa21.53■■□□□ 1.04
SSBP1-215ENST00000612337 RABGAP1Q9Y3P9 1069 aa21.53■■□□□ 1.04
SSBP1-215ENST00000612337 EVI5O60447 810 aa21.52■■□□□ 1.04
SSBP1-215ENST00000612337 VCAM1P19320 739 aa21.52■■□□□ 1.04
SSBP1-215ENST00000612337 CATSPERGQ6ZRH7 1159 aa21.52■■□□□ 1.04
SSBP1-215ENST00000612337 PLEKHH3Q7Z736 793 aa21.52■■□□□ 1.04
SSBP1-215ENST00000612337 RBM27Q9P2N5 1060 aaKnown RBP21.52■■□□□ 1.04
SSBP1-215ENST00000612337 LAMA3Q16787 3333 aa21.52■■□□□ 1.04
SSBP1-215ENST00000612337 PRKAR2AP13861 404 aaKnown RBP21.51■■□□□ 1.03
SSBP1-215ENST00000612337 GUCY1A2P33402 732 aa21.51■■□□□ 1.03
SSBP1-215ENST00000612337 MORN1Q5T089 497 aa21.51■■□□□ 1.03
SSBP1-215ENST00000612337 LCORLQ8N3X6 602 aa21.51■■□□□ 1.03
SSBP1-215ENST00000612337 DIS3LQ8TF46 1054 aaKnown RBP21.51■■□□□ 1.03
SSBP1-215ENST00000612337 PRO3102Q9H379 93 aa21.51■■□□□ 1.03
SSBP1-215ENST00000612337 DCP1AQ9NPI6 582 aaPredicted RBP21.51■■□□□ 1.03
SSBP1-215ENST00000612337 PAG1Q9NWQ8 432 aa21.51■■□□□ 1.03
SSBP1-215ENST00000612337 RCAN3Q9UKA8 241 aa21.51■■□□□ 1.03
SSBP1-215ENST00000612337 CNMDO75829 334 aa21.5■■□□□ 1.03
SSBP1-215ENST00000612337 ATP5JP18859 108 aa21.5■■□□□ 1.03
SSBP1-215ENST00000612337 RGS2P41220 211 aa21.5■■□□□ 1.03
SSBP1-215ENST00000612337 CCNA1P78396 465 aa21.5■■□□□ 1.03
SSBP1-215ENST00000612337 LBX2Q6XYB7 198 aa21.5■■□□□ 1.03
SSBP1-215ENST00000612337 SDR42E1Q8WUS8 393 aa21.5■■□□□ 1.03
SSBP1-215ENST00000612337 EDC3Q96F86 508 aaKnown RBP21.5■■□□□ 1.03
SSBP1-215ENST00000612337 BCL11AQ9H165 835 aa21.5■■□□□ 1.03
SSBP1-215ENST00000612337 ALPK3Q96L96 1907 aa21.49■■□□□ 1.03
SSBP1-215ENST00000612337 ZKSCAN1P17029 563 aaPredicted RBP21.49■■□□□ 1.03
SSBP1-215ENST00000612337 EVX2Q03828 476 aa21.49■■□□□ 1.03
SSBP1-215ENST00000612337 SEPT2Q15019 361 aa21.49■■□□□ 1.03
SSBP1-215ENST00000612337 APBA2Q99767 749 aa21.49■■□□□ 1.03
SSBP1-215ENST00000612337 BOLA2Q9H3K6 86 aa21.49■■□□□ 1.03
SSBP1-215ENST00000612337 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
SSBP1-215ENST00000612337 OGDHLQ9ULD0 1010 aa21.49■■□□□ 1.03
SSBP1-215ENST00000612337 ADD2P35612 726 aa21.48■■□□□ 1.03
SSBP1-215ENST00000612337 MNX1P50219 401 aaPredicted RBP21.48■■□□□ 1.03
SSBP1-215ENST00000612337 NBPF3Q9H094 633 aa21.48■■□□□ 1.03
SSBP1-215ENST00000612337 ARMT1Q9H993 441 aa21.48■■□□□ 1.03
SSBP1-215ENST00000612337 MPHOSPH10O00566 681 aaKnown RBP21.47■■□□□ 1.03
SSBP1-215ENST00000612337 GLRX3O76003 335 aaKnown RBP21.47■■□□□ 1.03
SSBP1-215ENST00000612337 CACNB2Q08289 660 aaPredicted RBP21.47■■□□□ 1.03
SSBP1-215ENST00000612337 HAUS7Q99871 368 aa21.47■■□□□ 1.03
SSBP1-215ENST00000612337 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.47■■□□□ 1.037e-14■□□□□ 9.4
SSBP1-215ENST00000612337 RPAP3Q9H6T3 665 aaPredicted RBP21.47■■□□□ 1.03
SSBP1-215ENST00000612337 SWAP70Q9UH65 585 aa21.47■■□□□ 1.03
SSBP1-215ENST00000612337 SPDYE16A6NNV3 312 aaPredicted RBP21.46■■□□□ 1.03
SSBP1-215ENST00000612337 CYP2D6P10635 497 aa21.46■■□□□ 1.03
SSBP1-215ENST00000612337 MAP2K5Q13163 448 aa21.46■■□□□ 1.03
SSBP1-215ENST00000612337 CCL14Q16627 93 aa21.46■■□□□ 1.03
SSBP1-215ENST00000612337 ATP8A2Q9NTI2 1148 aa21.46■■□□□ 1.03
SSBP1-215ENST00000612337 BTBD7Q9P203 1132 aa21.46■■□□□ 1.03
SSBP1-215ENST00000612337 A0A1W2PRG0 241 aa21.45■■□□□ 1.02
SSBP1-215ENST00000612337 MBD4O95243 580 aa21.45■■□□□ 1.02
SSBP1-215ENST00000612337 SLFNL1Q499Z3 407 aa21.45■■□□□ 1.02
SSBP1-215ENST00000612337 TMEM179Q6ZVK1 233 aa21.45■■□□□ 1.02
SSBP1-215ENST00000612337 SLC44A5Q8NCS7 719 aa21.45■■□□□ 1.02
SSBP1-215ENST00000612337 MYH8P13535 1937 aa21.45■■□□□ 1.02
SSBP1-215ENST00000612337 DNAH12Q6ZR08 3092 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 A0A1W2PPC1 479 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 SLC15A5A6NIM6 579 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 PRKAB2O43741 272 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 PTPREP23469 700 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 UBE3CQ15386 1083 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 C20orf194Q5TEA3 1177 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 DYNLL2Q96FJ2 89 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 LRRCC1Q9C099 1032 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 C11orf49Q9H6J7 331 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 HOXC10Q9NYD6 342 aa21.44■■□□□ 1.02
SSBP1-215ENST00000612337 MYH7P12883 1935 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms