RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 STMN4Q9H169 189 aaPredicted RBP16.36■□□□□ 0.21
VPS36-207ENST00000611132 GPR108Q9NPR9 543 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 SAMD15Q9P1V8 674 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 RASAL2Q9UJF2 1139 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 MLH3Q9UHC1 1453 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 KIF4AO95239 1232 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 ITGA6P23229 1130 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 CETN2P41208 172 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 COPB1P53618 953 aaKnown RBP16.36■□□□□ 0.21
VPS36-207ENST00000611132 RNASE9P60153 205 aaKnown RBP16.36■□□□□ 0.21
VPS36-207ENST00000611132 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
VPS36-207ENST00000611132 H7C1D1 291 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 ENC1O14682 589 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 DNM2P50570 870 aa16.36■□□□□ 0.21
VPS36-207ENST00000611132 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.36■□□□□ 0.21
VPS36-207ENST00000611132 TMEM232C9JQI7 657 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 PPFIA4O75335 1185 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 CCDC50Q8IVM0 306 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 ACRBPQ8NEB7 543 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 TSKSQ9UJT2 592 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 ANKRD62A6NC57 917 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 LRRC24Q50LG9 513 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 KRT79Q5XKE5 535 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 CNNM4Q6P4Q7 775 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 TOGARAM2Q6ZUX3 1019 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 ZNF654Q8IZM8 581 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 C6orf50Q9HD87 102 aa16.35■□□□□ 0.21
VPS36-207ENST00000611132 PTPN12Q05209 780 aaKnown RBP16.35■□□□□ 0.21
VPS36-207ENST00000611132 hCG_1642624A0A1W2PR95 340 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 TSPY3P0CV98 308 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 TSPY8P0CW00 308 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 SSR1P43307 286 aaKnown RBP16.34■□□□□ 0.21
VPS36-207ENST00000611132 KIAA1210Q9ULL0 1709 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 E7EVH7 732 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 TCP1P17987 556 aaKnown RBP16.34■□□□□ 0.21
VPS36-207ENST00000611132 ATP1A2P50993 1020 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 CCDC84Q86UT8 332 aaPredicted RBP16.34■□□□□ 0.21
VPS36-207ENST00000611132 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
VPS36-207ENST00000611132 CCDC172P0C7W6 258 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 RAPGEF1Q13905 1077 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 ICE2Q659A1 982 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 CCDC26Q8TAB7 109 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
VPS36-207ENST00000611132 HYOU1Q9Y4L1 999 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 A1BGP04217 495 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 TYW1BQ6NUM6 668 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 SV2BQ7L1I2 683 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 GRAMD1CQ8IYS0 662 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
VPS36-207ENST00000611132 CTNNBL1Q8WYA6 563 aaPredicted RBP16.34■□□□□ 0.21
VPS36-207ENST00000611132 CSRNP2Q9H175 543 aa16.34■□□□□ 0.21
VPS36-207ENST00000611132 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.21
VPS36-207ENST00000611132 YEATS2Q9ULM3 1422 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 BAG3O95817 575 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 CETN1Q12798 172 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 C2CD5Q86YS7 1000 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 IQCDQ96DY2 449 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 PLEKHA4Q9H4M7 779 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 SMIM23A6NLE4 172 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 M0R2C6 588 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 TRAF5O00463 557 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 GTPBP6O43824 516 aaPredicted RBP16.33■□□□□ 0.2
VPS36-207ENST00000611132 ZMYND10O75800 440 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 KRT13P13646 458 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 PRPHP41219 470 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 FOXP1Q9H334 677 aaPredicted RBP16.33■□□□□ 0.2
VPS36-207ENST00000611132 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 SWAP70Q9UH65 585 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 CLNS1AP54105 237 aaKnown RBP16.33■□□□□ 0.2
VPS36-207ENST00000611132 MRFAP1Q9Y605 127 aa16.33■□□□□ 0.2
VPS36-207ENST00000611132 SYMPKQ92797 1274 aaKnown RBP16.32■□□□□ 0.2
VPS36-207ENST00000611132 OSBP2Q969R2 916 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 PRDM1O75626 825 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 LDHCP07864 332 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 GNA11P29992 359 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 KLHL7Q8IXQ5 586 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
VPS36-207ENST00000611132 LETM2Q2VYF4 491 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 PPANQ9NQ55 473 aaKnown RBP16.32■□□□□ 0.2
VPS36-207ENST00000611132 FAM207AQ9NSI2 230 aaPredicted RBP16.32■□□□□ 0.2
VPS36-207ENST00000611132 TMEM2Q9UHN6 1383 aa16.32■□□□□ 0.2
VPS36-207ENST00000611132 EIF3CLB5ME19 914 aaKnown RBP16.31■□□□□ 0.2
VPS36-207ENST00000611132 UBE4AQ14139 1066 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 CEP85LQ5SZL2 805 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 EIF3CQ99613 913 aaKnown RBP16.31■□□□□ 0.2
VPS36-207ENST00000611132 MED23Q9ULK4 1368 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 SMYD4Q8IYR2 804 aaPredicted RBP16.31■□□□□ 0.2
VPS36-207ENST00000611132 WDR24Q96S15 920 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 ANKRD65E5RJM6 399 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 PDE6AP16499 860 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 RESP18Q5W5W9 173 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 GPIHBP1Q8IV16 184 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 IFNL3Q8IZI9 196 aa16.31■□□□□ 0.2
VPS36-207ENST00000611132 L2HGDHQ9H9P8 463 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms