RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 KAT14Q9H8E8 782 aa21.14■□□□□ 0.97
SNAPC3-207ENST00000610884 MPHOSPH10O00566 681 aaKnown RBP21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 FMNL1O95466 1100 aaPredicted RBP21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 LIG1P18858 919 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 ZNF445P59923 1031 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 ATP2B2Q01814 1243 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 NR5A1Q13285 461 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 CAMK4Q16566 473 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 RAD21O60216 631 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 EGFRP00533 1210 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 PRELPP51888 382 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 NOM1Q5C9Z4 860 aaKnown RBP21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 SGIP1Q9BQI5 828 aa21.13■□□□□ 0.97
SNAPC3-207ENST00000610884 LAMB1P07942 1786 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 CDKL5O76039 1030 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 CXCL9Q07325 125 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 DNAJC18Q9H819 358 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 KIF3AQ9Y496 699 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 DDX60LQ5H9U9 1706 aaKnown RBP21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 NFKBIEO00221 500 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 KIF23Q02241 960 aaPredicted RBP21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 FUT2Q10981 343 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 USP17L2Q6R6M4 530 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 LRRC47Q8N1G4 583 aaKnown RBP21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 SUPT20HQ8NEM7 779 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 SUGT1Q9Y2Z0 365 aa21.12■□□□□ 0.97
SNAPC3-207ENST00000610884 FAM205CA6NFA0 338 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 GNL2Q13823 731 aaKnown RBP21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 PKN1Q16512 942 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 SLC35G1Q2M3R5 365 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 CC2D2BQ6DHV5 1058 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 SERPINB13Q9UIV8 391 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 TGFB2P61812 414 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 PSMD1Q99460 953 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 ZSCAN16Q9H4T2 348 aaPredicted RBP21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 VAT1LQ9HCJ6 419 aa21.11■□□□□ 0.97
SNAPC3-207ENST00000610884 UBE2HP62256 183 aa21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 ZSCAN30Q86W11 494 aa21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 TRIM22Q8IYM9 498 aa21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 PCP11498 1178 aaKnown RBP21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 RSBN1LQ6PCB5 846 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 NIM1KQ8IY84 436 aa21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 CTCFLQ8NI51 663 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 GPKOWQ92917 476 aaPredicted RBP eCLIP21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.1■□□□□ 0.97
SNAPC3-207ENST00000610884 SHMT1P34896 483 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 HSP90AA2PQ14568 343 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 TMEM87AQ8NBN3 555 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 TAOK3Q9H2K8 898 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 VEZTQ9HBM0 779 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 FRMPD2Q68DX3 1309 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 GDF11O95390 407 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 MARCKSP29966 332 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 GABPAQ06546 454 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 TMED8Q6PL24 325 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 UBA5Q9GZZ9 404 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 RBSNQ9H1K0 784 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 CLIP2Q9UDT6 1046 aa21.09■□□□□ 0.97
SNAPC3-207ENST00000610884 ROBO3Q96MS0 1386 aa21.08■□□□□ 0.97
SNAPC3-207ENST00000610884 TRIM29Q14134 588 aa21.08■□□□□ 0.97
SNAPC3-207ENST00000610884 NBPF9Q3BBW0 867 aa21.08■□□□□ 0.97
SNAPC3-207ENST00000610884 EARS2Q5JPH6 523 aaKnown RBP21.08■□□□□ 0.97
SNAPC3-207ENST00000610884 TMTC3Q6ZXV5 915 aa21.08■□□□□ 0.97
SNAPC3-207ENST00000610884 ZNRF3Q9ULT6 936 aa21.08■□□□□ 0.97
SNAPC3-207ENST00000610884 GOLGA6L4A6NEF3 574 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 MSNP26038 577 aaKnown RBP21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 JAG1P78504 1218 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 CCDC196A0A1B0GTZ2 297 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 USP17L5A8MUK1 530 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 AKAP17AQ02040 695 aaKnown RBP21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 MYSM1Q5VVJ2 828 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 DGKHQ86XP1 1220 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 DIS3L2Q8IYB7 885 aaKnown RBP21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 RNF214Q8ND24 703 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 ERCC4Q92889 916 aaPredicted RBP21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 MAD2L2Q9UI95 211 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 SERPINA10Q9UK55 444 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 MRVI1Q9Y6F6 885 aa21.07■□□□□ 0.96
SNAPC3-207ENST00000610884 CYTH3O43739 400 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 NR1I2O75469 434 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 VIL1P09327 827 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 ME1P48163 572 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 NEDD1Q8NHV4 660 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 BICD2Q8TD16 824 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 SCAND2PQ9GZW5 306 aaPredicted RBP21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 GJA3Q9Y6H8 435 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 RRP1BQ14684 758 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 MIGA2Q7L4E1 593 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 HOMER1Q86YM7 354 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 ECM29Q5VYK3 1845 aa21.06■□□□□ 0.96
SNAPC3-207ENST00000610884 DEXIO95424 95 aa21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 MBD3O95983 291 aa21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 MTA3Q9BTC8 594 aa21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 ASTN2O75129 1339 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 OGFOD1Q8N543 542 aa21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 JDP2Q8WYK2 163 aa21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 GMLQ99445 158 aa21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 DACT1Q9NYF0 836 aa21.05■□□□□ 0.96
SNAPC3-207ENST00000610884 CNTNAP5Q8WYK1 1306 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms