RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 DPF3Q92784 378 aa18.35■□□□□ 0.53
TGFB1-202ENST00000597453 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.35■□□□□ 0.53
TGFB1-202ENST00000597453 PAG1Q9NWQ8 432 aa18.35■□□□□ 0.53
TGFB1-202ENST00000597453 MCM9Q9NXL9 1143 aa18.35■□□□□ 0.53
TGFB1-202ENST00000597453 TFRCP02786 760 aaKnown RBP18.34■□□□□ 0.53
TGFB1-202ENST00000597453 HMGCRP04035 888 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 CHGBP05060 677 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 CYP2D6P10635 497 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 ATP5JP18859 108 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 GUCY1A2P33402 732 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 ERVK-9P63128 1117 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 ERVK-24P63145 666 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 TRIB2Q92519 343 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 PAGR1Q9BTK6 254 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 CRISPLD2Q9H0B8 497 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 PORCNQ9H237 461 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 ARMT1Q9H993 441 aa18.34■□□□□ 0.53
TGFB1-202ENST00000597453 RANBP2P49792 3224 aaKnown RBP18.33■□□□□ 0.53
TGFB1-202ENST00000597453 VCAM1P19320 739 aa18.33■□□□□ 0.52
TGFB1-202ENST00000597453 CYP2B6P20813 491 aa18.33■□□□□ 0.52
TGFB1-202ENST00000597453 ADD2P35612 726 aa18.33■□□□□ 0.52
TGFB1-202ENST00000597453 HTATIP2Q9BUP3 242 aa18.33■□□□□ 0.52
TGFB1-202ENST00000597453 KIAA1683Q9H0B3 1180 aa18.33■□□□□ 0.52
TGFB1-202ENST00000597453 DCP1AQ9NPI6 582 aaPredicted RBP18.33■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L15C9J2P7 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L13C9JLJ4 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L11C9JVI0 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L18D6R9N7 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L22D6RA61 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L17D6RBQ6 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L19D6RCP7 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L20D6RJB6 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 PRKAB2O43741 272 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 SMARCA5O60264 1052 aaPredicted RBP18.32■□□□□ 0.52
TGFB1-202ENST00000597453 CNMDO75829 334 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 USP17L24Q0WX57 530 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 SEPT2Q15019 361 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 SLC44A5Q8NCS7 719 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 GTF3C2Q8WUA4 911 aaPredicted RBP18.32■□□□□ 0.52
TGFB1-202ENST00000597453 HAUS7Q99871 368 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 CABP5Q9NP86 173 aa18.32■□□□□ 0.52
TGFB1-202ENST00000597453 MBD4O95243 580 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 MAPK4P31152 587 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 USP14P54578 494 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 CATSPERGQ6ZRH7 1159 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 GPR142Q7Z601 462 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 NUDT12Q9BQG2 462 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 LRRCC1Q9C099 1032 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 RLFQ13129 1914 aa18.31■□□□□ 0.52
TGFB1-202ENST00000597453 RPTORQ8N122 1335 aa18.3■□□□□ 0.52
TGFB1-202ENST00000597453 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
TGFB1-202ENST00000597453 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
TGFB1-202ENST00000597453 FXR1P51114 621 aaKnown RBP eCLIP18.3■□□□□ 0.524e-6■■■□□ 17.7
TGFB1-202ENST00000597453 CHRDL2Q6WN34 429 aa18.3■□□□□ 0.52
TGFB1-202ENST00000597453 DIS3LQ8TF46 1054 aaKnown RBP18.3■□□□□ 0.52
TGFB1-202ENST00000597453 USP6NLQ92738 828 aa18.3■□□□□ 0.52
TGFB1-202ENST00000597453 DYNLL2Q96FJ2 89 aa18.3■□□□□ 0.52
TGFB1-202ENST00000597453 MPHOSPH10O00566 681 aaKnown RBP18.29■□□□□ 0.52
TGFB1-202ENST00000597453 XRCC5P13010 732 aaKnown RBP18.29■□□□□ 0.52
TGFB1-202ENST00000597453 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
TGFB1-202ENST00000597453 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
TGFB1-202ENST00000597453 PAWRQ96IZ0 340 aaKnown RBP18.29■□□□□ 0.52
TGFB1-202ENST00000597453 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.29■□□□□ 0.522e-8■■□□□ 11.5
TGFB1-202ENST00000597453 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
TGFB1-202ENST00000597453 HMX1Q9NP08 348 aaPredicted RBP18.29■□□□□ 0.52
TGFB1-202ENST00000597453 PCDH10Q9P2E7 1040 aa18.29■□□□□ 0.52
TGFB1-202ENST00000597453 RABGAP1Q9Y3P9 1069 aa18.29■□□□□ 0.52
TGFB1-202ENST00000597453 SZT2Q5T011 3432 aa18.29■□□□□ 0.52
TGFB1-202ENST00000597453 A0A0G2JMZ2 1700 aa18.29■□□□□ 0.52
TGFB1-202ENST00000597453 CYP2D7A0A087X1C5 515 aa18.28■□□□□ 0.52
TGFB1-202ENST00000597453 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
TGFB1-202ENST00000597453 CAPN2P17655 700 aa18.28■□□□□ 0.52
TGFB1-202ENST00000597453 CCL14Q16627 93 aa18.28■□□□□ 0.52
TGFB1-202ENST00000597453 MORN1Q5T089 497 aa18.28■□□□□ 0.52
TGFB1-202ENST00000597453 CCAR1Q8IX12 1150 aaKnown RBP18.28■□□□□ 0.52
TGFB1-202ENST00000597453 BTBD7Q9P203 1132 aa18.28■□□□□ 0.52
TGFB1-202ENST00000597453 PARP14Q460N5 1801 aa18.28■□□□□ 0.52
TGFB1-202ENST00000597453 SPDYE16A6NNV3 312 aaPredicted RBP18.27■□□□□ 0.52
TGFB1-202ENST00000597453 AKR1B1P15121 316 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 ZKSCAN1P17029 563 aaPredicted RBP18.27■□□□□ 0.52
TGFB1-202ENST00000597453 RGS2P41220 211 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 UBE3CQ15386 1083 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 LBX2Q6XYB7 198 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 ATP8A2Q9NTI2 1148 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 SWAP70Q9UH65 585 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 FRMPD3Q5JV73 1810 aa18.27■□□□□ 0.52
TGFB1-202ENST00000597453 MNX1P50219 401 aaPredicted RBP18.26■□□□□ 0.51
TGFB1-202ENST00000597453 KIAA1755Q5JYT7 1200 aa18.26■□□□□ 0.51
TGFB1-202ENST00000597453 TMEM179Q6ZVK1 233 aa18.26■□□□□ 0.51
TGFB1-202ENST00000597453 ANKLE1Q8NAG6 615 aa18.26■□□□□ 0.51
TGFB1-202ENST00000597453 APBA2Q99767 749 aa18.26■□□□□ 0.51
TGFB1-202ENST00000597453 PUS7LQ9H0K6 701 aaKnown RBP18.26■□□□□ 0.51
TGFB1-202ENST00000597453 NR2E3Q9Y5X4 410 aa18.26■□□□□ 0.51
TGFB1-202ENST00000597453 USP17L12C9JPN9 530 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 USP17L21D6R901 530 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 EVI5O60447 810 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 CCNA1P78396 465 aa18.25■□□□□ 0.51
TGFB1-202ENST00000597453 CACNB2Q08289 660 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms