RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
HDAC5-208ENST00000588419 TATDN1Q6P1N9 297 aa16.63■□□□□ 0.25
HDAC5-208ENST00000588419 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
HDAC5-208ENST00000588419 ACER1Q8TDN7 264 aa16.63■□□□□ 0.25
HDAC5-208ENST00000588419 GTF3C2Q8WUA4 911 aaPredicted RBP16.63■□□□□ 0.25
HDAC5-208ENST00000588419 EHD4Q9H223 541 aa16.63■□□□□ 0.25
HDAC5-208ENST00000588419 MCM9Q9NXL9 1143 aa16.63■□□□□ 0.25
HDAC5-208ENST00000588419 ZMYND8Q9ULU4 1186 aaPredicted RBP16.63■□□□□ 0.25
HDAC5-208ENST00000588419 COG6Q9Y2V7 657 aa16.63■□□□□ 0.25
HDAC5-208ENST00000588419 COL11A1P12107 1806 aaPredicted RBP16.63■□□□□ 0.25
HDAC5-208ENST00000588419 PARP14Q460N5 1801 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L15C9J2P7 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L13C9JLJ4 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L11C9JVI0 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L18D6R9N7 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L22D6RA61 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L17D6RBQ6 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L19D6RCP7 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L20D6RJB6 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 PDE6AP16499 860 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 VCAM1P19320 739 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 RGS2P41220 211 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 PLCD1P51178 756 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP14P54578 494 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 EVX2Q03828 476 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 USP17L24Q0WX57 530 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 PLEKHH3Q7Z736 793 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 SDR42E1Q8WUS8 393 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
HDAC5-208ENST00000588419 CRNKL1Q9BZJ0 848 aaKnown RBP16.62■□□□□ 0.25
HDAC5-208ENST00000588419 C11orf49Q9H6J7 331 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 ZNF532Q9HCE3 1301 aa16.62■□□□□ 0.25
HDAC5-208ENST00000588419 SYN1P17600 705 aa16.61■□□□□ 0.25
HDAC5-208ENST00000588419 SHMT1P34896 483 aa16.61■□□□□ 0.25
HDAC5-208ENST00000588419 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
HDAC5-208ENST00000588419 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
HDAC5-208ENST00000588419 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
HDAC5-208ENST00000588419 APBA2Q99767 749 aa16.61■□□□□ 0.25
HDAC5-208ENST00000588419 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
HDAC5-208ENST00000588419 RPAP3Q9H6T3 665 aaPredicted RBP16.61■□□□□ 0.25
HDAC5-208ENST00000588419 A0A0G2JMZ2 1700 aa16.61■□□□□ 0.25
HDAC5-208ENST00000588419 HMMRO75330 724 aa16.6■□□□□ 0.25
HDAC5-208ENST00000588419 MS4A1P11836 297 aa16.6■□□□□ 0.25
HDAC5-208ENST00000588419 CAPN2P17655 700 aa16.6■□□□□ 0.25
HDAC5-208ENST00000588419 CCND3P30281 292 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-208ENST00000588419 CCNA1P78396 465 aa16.6■□□□□ 0.25
HDAC5-208ENST00000588419 SEPT2Q15019 361 aa16.6■□□□□ 0.25
HDAC5-208ENST00000588419 SAMD1Q6SPF0 538 aaPredicted RBP16.6■□□□□ 0.25
HDAC5-208ENST00000588419 LCORLQ8N3X6 602 aa16.6■□□□□ 0.25
HDAC5-208ENST00000588419 C12orf42Q96LP6 360 aa16.6■□□□□ 0.25
HDAC5-208ENST00000588419 ZNFX1Q9P2E3 1918 aaKnown RBP16.6■□□□□ 0.25
HDAC5-208ENST00000588419 RLFQ13129 1914 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 CNMDO75829 334 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 CYP2D6P10635 497 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 CACNB2Q08289 660 aaPredicted RBP16.59■□□□□ 0.25
HDAC5-208ENST00000588419 POTEEQ6S8J3 1075 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 CATSPERGQ6ZRH7 1159 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 TRMT44Q8IYL2 757 aaKnown RBP16.59■□□□□ 0.25
HDAC5-208ENST00000588419 TANGO6Q9C0B7 1094 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 KIAA1683Q9H0B3 1180 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 ARMT1Q9H993 441 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 DDX19BQ9UMR2 479 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 RABGAP1Q9Y3P9 1069 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 IVNS1ABPQ9Y6Y0 642 aa16.59■□□□□ 0.25
HDAC5-208ENST00000588419 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
HDAC5-208ENST00000588419 XRCC5P13010 732 aaKnown RBP16.58■□□□□ 0.24
HDAC5-208ENST00000588419 MAP2K5Q13163 448 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 MORN1Q5T089 497 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 MAP3K21Q5TCX8 1036 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 SLC44A5Q8NCS7 719 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 PRO3102Q9H379 93 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 BTBD7Q9P203 1132 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 OGDHLQ9ULD0 1010 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 PLXNA1Q9UIW2 1896 aa16.58■□□□□ 0.24
HDAC5-208ENST00000588419 ZNF236Q9UL36 1845 aa16.57■□□□□ 0.24
HDAC5-208ENST00000588419 SPDYE16A6NNV3 312 aaPredicted RBP16.57■□□□□ 0.24
HDAC5-208ENST00000588419 MBD4O95243 580 aa16.57■□□□□ 0.24
HDAC5-208ENST00000588419 CNGA1P29973 690 aa16.57■□□□□ 0.24
HDAC5-208ENST00000588419 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
HDAC5-208ENST00000588419 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
HDAC5-208ENST00000588419 CLEC10AQ8IUN9 316 aa16.57■□□□□ 0.24
HDAC5-208ENST00000588419 RPAP2Q8IXW5 612 aaPredicted RBP16.57■□□□□ 0.24
HDAC5-208ENST00000588419 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
HDAC5-208ENST00000588419 PFASO15067 1338 aa16.56■□□□□ 0.24
HDAC5-208ENST00000588419 SOX1O00570 391 aaPredicted RBP16.56■□□□□ 0.24
HDAC5-208ENST00000588419 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
HDAC5-208ENST00000588419 MFSD14CQ5VZR4 134 aa16.56■□□□□ 0.24
HDAC5-208ENST00000588419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.56■□□□□ 0.24
HDAC5-208ENST00000588419 USP6NLQ92738 828 aa16.56■□□□□ 0.24
HDAC5-208ENST00000588419 DYNLL2Q96FJ2 89 aa16.56■□□□□ 0.24
HDAC5-208ENST00000588419 LRCH3Q96II8 777 aa16.56■□□□□ 0.24
HDAC5-208ENST00000588419 DCP1AQ9NPI6 582 aaPredicted RBP16.56■□□□□ 0.24
HDAC5-208ENST00000588419 FLRT1Q9NZU1 646 aa16.56■□□□□ 0.24
HDAC5-208ENST00000588419 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
HDAC5-208ENST00000588419 TCRBV5S4A2TA0A5A2 114 aa16.55■□□□□ 0.24
HDAC5-208ENST00000588419 PRKAB2O43741 272 aa16.55■□□□□ 0.24
HDAC5-208ENST00000588419 PTPREP23469 700 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms