RNA–Protein interactions for RNA: ENST00000585849.1

TMC6-204, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-204ENST00000585849 RBPJLQ9UBG7 517 aa23.16■■□□□ 1.3
TMC6-204ENST00000585849 USP17L15C9J2P7 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L13C9JLJ4 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L11C9JVI0 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L18D6R9N7 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L22D6RA61 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L17D6RBQ6 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L19D6RCP7 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L20D6RJB6 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 ERVK-9P63128 1117 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 ERVK-24P63145 666 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 USP17L24Q0WX57 530 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 LCORLQ8N3X6 602 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 SOCS4Q8WXH5 440 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 NUDT12Q9BQG2 462 aa23.15■■□□□ 1.3
TMC6-204ENST00000585849 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.15■■□□□ 1.32e-9■□□□□ 8.7
TMC6-204ENST00000585849 PEX10O60683 326 aa23.14■■□□□ 1.29
TMC6-204ENST00000585849 SDR42E1Q8WUS8 393 aa23.14■■□□□ 1.29
TMC6-204ENST00000585849 LRRCC1Q9C099 1032 aa23.14■■□□□ 1.29
TMC6-204ENST00000585849 DCP1AQ9NPI6 582 aaPredicted RBP23.14■■□□□ 1.29
TMC6-204ENST00000585849 GABPAQ06546 454 aa23.13■■□□□ 1.29
TMC6-204ENST00000585849 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
TMC6-204ENST00000585849 HAUS7Q99871 368 aa23.13■■□□□ 1.29
TMC6-204ENST00000585849 ARMT1Q9H993 441 aa23.13■■□□□ 1.29
TMC6-204ENST00000585849 CWC22Q9HCG8 908 aaKnown RBP23.13■■□□□ 1.29
TMC6-204ENST00000585849 HMX1Q9NP08 348 aaPredicted RBP23.13■■□□□ 1.29
TMC6-204ENST00000585849 COLQQ9Y215 455 aaPredicted RBP23.13■■□□□ 1.29
TMC6-204ENST00000585849 RPTORQ8N122 1335 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 MPHOSPH10O00566 681 aaKnown RBP23.12■■□□□ 1.29
TMC6-204ENST00000585849 VCAM1P19320 739 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 CYP2B6P20813 491 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 ADD2P35612 726 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 Q3C1V9 767 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 TRMT44Q8IYL2 757 aaKnown RBP23.12■■□□□ 1.29
TMC6-204ENST00000585849 ACER1Q8TDN7 264 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 CRISPLD2Q9H0B8 497 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 RABGAP1Q9Y3P9 1069 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 NR2E3Q9Y5X4 410 aa23.12■■□□□ 1.29
TMC6-204ENST00000585849 MBD4O95243 580 aa23.11■■□□□ 1.29
TMC6-204ENST00000585849 XRCC5P13010 732 aaKnown RBP23.11■■□□□ 1.29
TMC6-204ENST00000585849 CCNA1P78396 465 aa23.11■■□□□ 1.29
TMC6-204ENST00000585849 SEPT2Q15019 361 aa23.11■■□□□ 1.29
TMC6-204ENST00000585849 CATSPERGQ6ZRH7 1159 aa23.11■■□□□ 1.29
TMC6-204ENST00000585849 TRIB2Q92519 343 aa23.11■■□□□ 1.29
TMC6-204ENST00000585849 ATP8A2Q9NTI2 1148 aa23.11■■□□□ 1.29
TMC6-204ENST00000585849 SWAP70Q9UH65 585 aa23.11■■□□□ 1.29
TMC6-204ENST00000585849 TRIOBPQ9H2D6 2365 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 GUCY1A2P33402 732 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 ZSCAN25Q6NSZ9 544 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 GPR142Q7Z601 462 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 PLEKHH3Q7Z736 793 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 AMOTL1Q8IY63 956 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 PORCNQ9H237 461 aa23.1■■□□□ 1.29
TMC6-204ENST00000585849 GLRX3O76003 335 aaKnown RBP23.09■■□□□ 1.29
TMC6-204ENST00000585849 CYP2D6P10635 497 aa23.09■■□□□ 1.29
TMC6-204ENST00000585849 RGS2P41220 211 aa23.09■■□□□ 1.29
TMC6-204ENST00000585849 TRIM32Q13049 653 aa23.09■■□□□ 1.29
TMC6-204ENST00000585849 ANKLE1Q8NAG6 615 aa23.09■■□□□ 1.29
TMC6-204ENST00000585849 RPAP3Q9H6T3 665 aaPredicted RBP23.09■■□□□ 1.29
TMC6-204ENST00000585849 ALPK3Q96L96 1907 aa23.09■■□□□ 1.29
TMC6-204ENST00000585849 ZKSCAN1P17029 563 aaPredicted RBP23.08■■□□□ 1.29
TMC6-204ENST00000585849 EVX2Q03828 476 aa23.08■■□□□ 1.29
TMC6-204ENST00000585849 UBE3CQ15386 1083 aa23.08■■□□□ 1.29
TMC6-204ENST00000585849 POTEEQ6S8J3 1075 aa23.08■■□□□ 1.29
TMC6-204ENST00000585849 TMEM179Q6ZVK1 233 aa23.08■■□□□ 1.29
TMC6-204ENST00000585849 PRKAB2O43741 272 aa23.07■■□□□ 1.28
TMC6-204ENST00000585849 SMARCA5O60264 1052 aaPredicted RBP23.07■■□□□ 1.28
TMC6-204ENST00000585849 PRKAR2AP13861 404 aaKnown RBP23.07■■□□□ 1.28
TMC6-204ENST00000585849 SLFNL1Q499Z3 407 aa23.07■■□□□ 1.28
TMC6-204ENST00000585849 MORN1Q5T089 497 aa23.07■■□□□ 1.28
TMC6-204ENST00000585849 CHRDL2Q6WN34 429 aa23.07■■□□□ 1.28
TMC6-204ENST00000585849 LBX2Q6XYB7 198 aa23.07■■□□□ 1.28
TMC6-204ENST00000585849 NECAB2Q7Z6G3 386 aa23.07■■□□□ 1.28
TMC6-204ENST00000585849 USP6NLQ92738 828 aa23.07■■□□□ 1.28
TMC6-204ENST00000585849 PAWRQ96IZ0 340 aaKnown RBP23.07■■□□□ 1.28
TMC6-204ENST00000585849 EVI5O60447 810 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 CNMDO75829 334 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 MAP3K21Q5TCX8 1036 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 WDR78Q5VTH9 848 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 SLC44A5Q8NCS7 719 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 DYNLL2Q96FJ2 89 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 APBA2Q99767 749 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 ECHDC1Q9NTX5 307 aa23.06■■□□□ 1.28
TMC6-204ENST00000585849 GPATCH3Q96I76 525 aa23.05■■□□□ 1.28
TMC6-204ENST00000585849 ARHGEF10LQ9HCE6 1279 aa23.05■■□□□ 1.28
TMC6-204ENST00000585849 IVNS1ABPQ9Y6Y0 642 aa23.05■■□□□ 1.28
TMC6-204ENST00000585849 RLFQ13129 1914 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 A0A1W2PRG0 241 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 SPDYE16A6NNV3 312 aaPredicted RBP23.04■■□□□ 1.28
TMC6-204ENST00000585849 FXR1P51114 621 aaKnown RBP eCLIP23.04■■□□□ 1.28
TMC6-204ENST00000585849 MAP2K5Q13163 448 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 C12orf60Q5U649 245 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 DIS3LQ8TF46 1054 aaKnown RBP23.04■■□□□ 1.28
TMC6-204ENST00000585849 CCDC17Q96LX7 622 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 TANGO6Q9C0B7 1094 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 SH2D4AQ9H788 454 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 HOXC10Q9NYD6 342 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 SLC4A4Q9Y6R1 1079 aa23.04■■□□□ 1.28
TMC6-204ENST00000585849 SLC15A5A6NIM6 579 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms