RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 CCAR1Q8IX12 1150 aaKnown RBP11.68□□□□□ -0.54
TRIM25-204ENST00000570749 CCDC17Q96LX7 622 aa11.68□□□□□ -0.54
TRIM25-204ENST00000570749 HTATIP2Q9BUP3 242 aa11.68□□□□□ -0.54
TRIM25-204ENST00000570749 RNF208Q9H0X6 261 aa11.68□□□□□ -0.54
TRIM25-204ENST00000570749 GABRQQ9UN88 632 aa11.68□□□□□ -0.54
TRIM25-204ENST00000570749 CEP290O15078 2479 aa11.68□□□□□ -0.54
TRIM25-204ENST00000570749 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 ERC2O15083 957 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 INHAP05111 366 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 XRCC5P13010 732 aaKnown RBP11.67□□□□□ -0.54
TRIM25-204ENST00000570749 PLCD1P51178 756 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 GIMAP6Q6P9H5 292 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 LCORLQ8N3X6 602 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 LPAR1Q92633 364 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 NUDT12Q9BQG2 462 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 EMILIN3Q9NT22 766 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 ARPP21Q9UBL0 812 aaPredicted RBP11.67□□□□□ -0.54
TRIM25-204ENST00000570749 RABGAP1Q9Y3P9 1069 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 ZNF236Q9UL36 1845 aa11.67□□□□□ -0.54
TRIM25-204ENST00000570749 A0A0G2JMZ2 1700 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 MBD4O95243 580 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 SGPL1O95470 568 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 GNAT2P19087 354 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 ERVK-24P63145 666 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 JAG1P78504 1218 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 MTFR1Q15390 333 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 KBTBD3Q8NAB2 608 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 ANKLE1Q8NAG6 615 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 P2RX7Q99572 595 aaKnown RBP11.66□□□□□ -0.54
TRIM25-204ENST00000570749 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
TRIM25-204ENST00000570749 PAK6Q9NQU5 681 aaPredicted RBP11.66□□□□□ -0.54
TRIM25-204ENST00000570749 VCAM1P19320 739 aa11.65□□□□□ -0.54
TRIM25-204ENST00000570749 CATSPERGQ6ZRH7 1159 aa11.65□□□□□ -0.54
TRIM25-204ENST00000570749 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
TRIM25-204ENST00000570749 MB21D1Q8N884 522 aa11.65□□□□□ -0.54
TRIM25-204ENST00000570749 U2AF1L4Q8WU68 220 aaKnown RBP11.65□□□□□ -0.54
TRIM25-204ENST00000570749 ARMT1Q9H993 441 aa11.65□□□□□ -0.54
TRIM25-204ENST00000570749 ZNF287Q9HBT7 754 aa11.65□□□□□ -0.54
TRIM25-204ENST00000570749 CWC22Q9HCG8 908 aaKnown RBP11.65□□□□□ -0.54
TRIM25-204ENST00000570749 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
TRIM25-204ENST00000570749 GJD2Q9UKL4 321 aa11.65□□□□□ -0.54
TRIM25-204ENST00000570749 PARP14Q460N5 1801 aa11.65□□□□□ -0.55
TRIM25-204ENST00000570749 RPTORQ8N122 1335 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 MPHOSPH10O00566 681 aaKnown RBP11.64□□□□□ -0.55
TRIM25-204ENST00000570749 ECM2O94769 699 aaPredicted RBP11.64□□□□□ -0.55
TRIM25-204ENST00000570749 ELNP15502 786 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 RGS2P41220 211 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
TRIM25-204ENST00000570749 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 C12orf60Q5U649 245 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 C16orf86Q6ZW13 317 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 UBE2Q1Q7Z7E8 422 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 APPBP2Q92624 585 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 EDC3Q96F86 508 aaKnown RBP11.64□□□□□ -0.55
TRIM25-204ENST00000570749 UNC93B1Q9H1C4 597 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
TRIM25-204ENST00000570749 HOXC10Q9NYD6 342 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 RBPJLQ9UBG7 517 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
TRIM25-204ENST00000570749 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
TRIM25-204ENST00000570749 RLFQ13129 1914 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 FARP2O94887 1054 aaPredicted RBP11.63□□□□□ -0.55
TRIM25-204ENST00000570749 MYCP01106 439 aaPredicted RBP11.63□□□□□ -0.55
TRIM25-204ENST00000570749 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
TRIM25-204ENST00000570749 ICA1Q05084 483 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 COG2Q14746 738 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 SEPT2Q15019 361 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 PLEKHH3Q7Z736 793 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 APBA2Q99767 749 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 PAGR1Q9BTK6 254 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 CRISPLD2Q9H0B8 497 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.63□□□□□ -0.551e-7■■□□□ 12.5
TRIM25-204ENST00000570749 BCL11AQ9H165 835 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
TRIM25-204ENST00000570749 IVNS1ABPQ9Y6Y0 642 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 ROBO3Q96MS0 1386 aa11.63□□□□□ -0.55
TRIM25-204ENST00000570749 USP17L12C9JPN9 530 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 USP17L21D6R901 530 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
TRIM25-204ENST00000570749 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
TRIM25-204ENST00000570749 STRNO43815 780 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
TRIM25-204ENST00000570749 TFRCP02786 760 aaKnown RBP11.62□□□□□ -0.55
TRIM25-204ENST00000570749 GUCY1A2P33402 732 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
TRIM25-204ENST00000570749 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
TRIM25-204ENST00000570749 GPR142Q7Z601 462 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 SHCBP1Q8NEM2 672 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 ACER1Q8TDN7 264 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 VCPKMTQ9H867 229 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 KANSL2Q9H9L4 492 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 SYNPO2Q9UMS6 1093 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 TMX2Q9Y320 296 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 NR2E3Q9Y5X4 410 aa11.62□□□□□ -0.55
TRIM25-204ENST00000570749 FRMPD3Q5JV73 1810 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms