RNA–Protein interactions for RNA: ENST00000568790.5

COQ9-215, Transcript of coenzyme Q9, human

TSL 2

Gene COQ9, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COQ9-215	ENST00000568790	AMOTL1	Q8IY63	956 aa		27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	TRMT44	Q8IYL2	757 aa	Known RBP	27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	SOCS4	Q8WXH5	440 aa		27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	DDRGK1	Q96HY6	314 aa		27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	DEFB118	Q96PH6	123 aa		27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	DCP1A	Q9NPI6	582 aa	Predicted RBP	27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	PAK6	Q9NQU5	681 aa	Predicted RBP	27.69	■■■□□ 2.02
COQ9-215	ENST00000568790	FARP2	O94887	1054 aa	Predicted RBP	27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	ADD2	P35612	726 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	ERVK-9	P63128	1117 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	ERVK-24	P63145	666 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	CCNA1	P78396	465 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	GABPA	Q06546	454 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	UBE2Q1	Q7Z7E8	422 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	PCDH10	Q9P2E7	1040 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	SWAP70	Q9UH65	585 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	RABGAP1	Q9Y3P9	1069 aa		27.68	■■■□□ 2.02
COQ9-215	ENST00000568790	SMARCA5	O60264	1052 aa	Predicted RBP	27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	XRCC5	P13010	732 aa	Known RBP	27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	ZYX	Q15942	572 aa	Known RBP	27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	LCORL	Q8N3X6	602 aa		27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	SDR42E1	Q8WUS8	393 aa		27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	CWC22	Q9HCG8	908 aa	Known RBP	27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	TXNRD2	Q9NNW7	524 aa		27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	RPTOR	Q8N122	1335 aa		27.67	■■■□□ 2.02
COQ9-215	ENST00000568790	MPHOSPH10	O00566	681 aa	Known RBP	27.66	■■■□□ 2.02
COQ9-215	ENST00000568790	GLRX3	O76003	335 aa	Known RBP	27.66	■■■□□ 2.02
COQ9-215	ENST00000568790	UBE3C	Q15386	1083 aa		27.66	■■■□□ 2.02
COQ9-215	ENST00000568790	CATSPERG	Q6ZRH7	1159 aa		27.66	■■■□□ 2.02
COQ9-215	ENST00000568790	PAGR1	Q9BTK6	254 aa		27.66	■■■□□ 2.02
COQ9-215	ENST00000568790	ARMT1	Q9H993	441 aa		27.66	■■■□□ 2.02
COQ9-215	ENST00000568790	HMX1	Q9NP08	348 aa	Predicted RBP	27.66	■■■□□ 2.02
COQ9-215	ENST00000568790	NR2E3	Q9Y5X4	410 aa		27.66	■■■□□ 2.02
COQ9-215	ENST00000568790		H0YGN5	161 aa		27.65	■■■□□ 2.02
COQ9-215	ENST00000568790		Q3C1V9	767 aa		27.65	■■■□□ 2.02
COQ9-215	ENST00000568790	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	27.65	■■■□□ 2.02
COQ9-215	ENST00000568790	MBD4	O95243	580 aa		27.64	■■■□□ 2.02
COQ9-215	ENST00000568790	CYP2B6	P20813	491 aa		27.64	■■■□□ 2.02
COQ9-215	ENST00000568790	PLEKHH3	Q7Z736	793 aa		27.64	■■■□□ 2.02
COQ9-215	ENST00000568790	ACER1	Q8TDN7	264 aa		27.64	■■■□□ 2.02
COQ9-215	ENST00000568790	GPATCH3	Q96I76	525 aa		27.64	■■■□□ 2.02
COQ9-215	ENST00000568790	CRISPLD2	Q9H0B8	497 aa		27.64	■■■□□ 2.02
COQ9-215	ENST00000568790	CEP290	O15078	2479 aa		27.63	■■■□□ 2.01
COQ9-215	ENST00000568790	VCAM1	P19320	739 aa		27.63	■■■□□ 2.01
COQ9-215	ENST00000568790	SEPT2	Q15019	361 aa		27.63	■■■□□ 2.01
COQ9-215	ENST00000568790	TMEM179	Q6ZVK1	233 aa		27.63	■■■□□ 2.01
COQ9-215	ENST00000568790	ECHDC1	Q9NTX5	307 aa		27.63	■■■□□ 2.01
COQ9-215	ENST00000568790	NAV1	Q8NEY1	1877 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	RGS2	P41220	211 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	SLFNL1	Q499Z3	407 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	LBX2	Q6XYB7	198 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	GPR142	Q7Z601	462 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	ANKLE1	Q8NAG6	615 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	CCDC17	Q96LX7	622 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	DCTPP1	Q9H773	170 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	HOXC10	Q9NYD6	342 aa		27.62	■■■□□ 2.01
COQ9-215	ENST00000568790	GUCY1A2	P33402	732 aa		27.61	■■■□□ 2.01
COQ9-215	ENST00000568790	RPAP3	Q9H6T3	665 aa	Predicted RBP	27.61	■■■□□ 2.01
COQ9-215	ENST00000568790	PORCN	Q9H237	461 aa		27.6	■■■□□ 2.01
COQ9-215	ENST00000568790	SH2D4A	Q9H788	454 aa		27.6	■■■□□ 2.01
COQ9-215	ENST00000568790	PEX10	O60683	326 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	ZKSCAN1	P17029	563 aa	Predicted RBP	27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	COG2	Q14746	738 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	MORN1	Q5T089	497 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	C12orf60	Q5U649	245 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	NECAB2	Q7Z6G3	386 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	TRIB2	Q92519	343 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	ARHGEF10L	Q9HCE6	1279 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	COLQ	Q9Y215	455 aa	Predicted RBP	27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	SLC4A4	Q9Y6R1	1079 aa		27.59	■■■□□ 2.01
COQ9-215	ENST00000568790	DDX60L	Q5H9U9	1706 aa	Known RBP	27.58	■■■□□ 2.01
COQ9-215	ENST00000568790	PRKAB2	O43741	272 aa		27.58	■■■□□ 2.01
COQ9-215	ENST00000568790	CYP2D6	P10635	497 aa		27.58	■■■□□ 2.01
COQ9-215	ENST00000568790	USP6NL	Q92738	828 aa		27.58	■■■□□ 2.01
COQ9-215	ENST00000568790	IVNS1ABP	Q9Y6Y0	642 aa		27.58	■■■□□ 2.01
COQ9-215	ENST00000568790	USP17L12	C9JPN9	530 aa		27.57	■■■□□ 2
COQ9-215	ENST00000568790	USP17L21	D6R901	530 aa		27.57	■■■□□ 2
COQ9-215	ENST00000568790	EVI5	O60447	810 aa		27.57	■■■□□ 2
COQ9-215	ENST00000568790	CHGB	P05060	677 aa		27.57	■■■□□ 2
COQ9-215	ENST00000568790	EVX2	Q03828	476 aa		27.57	■■■□□ 2
COQ9-215	ENST00000568790	LPAR1	Q92633	364 aa		27.57	■■■□□ 2
COQ9-215	ENST00000568790	DYNLL2	Q96FJ2	89 aa		27.57	■■■□□ 2
COQ9-215	ENST00000568790	PRKAR2A	P13861	404 aa	Known RBP	27.56	■■■□□ 2
COQ9-215	ENST00000568790	CDK8	P49336	464 aa		27.56	■■■□□ 2
COQ9-215	ENST00000568790	LRRFIP1	Q32MZ4	808 aa	Known RBP	27.56	■■■□□ 2
COQ9-215	ENST00000568790	MAP3K21	Q5TCX8	1036 aa		27.56	■■■□□ 2
COQ9-215	ENST00000568790	WDR78	Q5VTH9	848 aa		27.56	■■■□□ 2
COQ9-215	ENST00000568790	POTEE	Q6S8J3	1075 aa		27.56	■■■□□ 2
COQ9-215	ENST00000568790	PAWR	Q96IZ0	340 aa	Known RBP	27.56	■■■□□ 2
COQ9-215	ENST00000568790	APBA2	Q99767	749 aa		27.56	■■■□□ 2
COQ9-215	ENST00000568790		A0A1W2PRG0	241 aa		27.55	■■■□□ 2
COQ9-215	ENST00000568790	SLC15A5	A6NIM6	579 aa		27.55	■■■□□ 2
COQ9-215	ENST00000568790	CNMD	O75829	334 aa		27.55	■■■□□ 2
COQ9-215	ENST00000568790	TRIM32	Q13049	653 aa		27.55	■■■□□ 2
COQ9-215	ENST00000568790	MAP2K5	Q13163	448 aa		27.55	■■■□□ 2
COQ9-215	ENST00000568790	SLC44A5	Q8NCS7	719 aa		27.55	■■■□□ 2
COQ9-215	ENST00000568790	PLXNB2	O15031	1838 aa		27.55	■■■□□ 2
COQ9-215	ENST00000568790	SPDYE16	A6NNV3	312 aa	Predicted RBP	27.54	■■■□□ 2
COQ9-215	ENST00000568790	TSHZ3	Q63HK5	1081 aa		27.54	■■■□□ 2
COQ9-215	ENST00000568790	C16orf86	Q6ZW13	317 aa		27.54	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms