RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 USP17L18D6R9N7 530 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 USP17L22D6RA61 530 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 USP17L17D6RBQ6 530 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 USP17L19D6RCP7 530 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 USP17L20D6RJB6 530 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 CAPN2P17655 700 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 ERVK-9P63128 1117 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 ERVK-24P63145 666 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 USP17L24Q0WX57 530 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 Q3C1V9 767 aa22.85■■□□□ 1.25
SPSB3-210ENST00000568416 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.85■■□□□ 1.25
SPSB3-210ENST00000568416 PRKAB2O43741 272 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 MBD4O95243 580 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 HMGCRP04035 888 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 CHGBP05060 677 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 CYP2D6P10635 497 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 SEPT2Q15019 361 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 UBE3CQ15386 1083 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 HABP4Q5JVS0 413 aaKnown RBP22.84■■□□□ 1.25
SPSB3-210ENST00000568416 CATSPERGQ6ZRH7 1159 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 DEFB118Q96PH6 123 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 ATP8A2Q9NTI2 1148 aa22.84■■□□□ 1.25
SPSB3-210ENST00000568416 FARP2O94887 1054 aaPredicted RBP22.83■■□□□ 1.25
SPSB3-210ENST00000568416 VCAM1P19320 739 aa22.83■■□□□ 1.25
SPSB3-210ENST00000568416 MAPK4P31152 587 aa22.83■■□□□ 1.25
SPSB3-210ENST00000568416 PAGR1Q9BTK6 254 aa22.83■■□□□ 1.25
SPSB3-210ENST00000568416 CRISPLD2Q9H0B8 497 aa22.83■■□□□ 1.25
SPSB3-210ENST00000568416 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.83■■□□□ 1.25
SPSB3-210ENST00000568416 PORCNQ9H237 461 aa22.83■■□□□ 1.25
SPSB3-210ENST00000568416 DCTPP1Q9H773 170 aa22.83■■□□□ 1.25
SPSB3-210ENST00000568416 CNMDO75829 334 aa22.82■■□□□ 1.24
SPSB3-210ENST00000568416 TRIM32Q13049 653 aa22.82■■□□□ 1.24
SPSB3-210ENST00000568416 SOCS4Q8WXH5 440 aa22.82■■□□□ 1.24
SPSB3-210ENST00000568416 TRIB2Q92519 343 aa22.82■■□□□ 1.24
SPSB3-210ENST00000568416 NUDT12Q9BQG2 462 aa22.82■■□□□ 1.24
SPSB3-210ENST00000568416 SWAP70Q9UH65 585 aa22.82■■□□□ 1.24
SPSB3-210ENST00000568416 RABGAP1Q9Y3P9 1069 aa22.82■■□□□ 1.24
SPSB3-210ENST00000568416 PLXNB2O15031 1838 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 A0A1W2PRG0 241 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 H0YGN5 161 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 TFRCP02786 760 aaKnown RBP22.81■■□□□ 1.24
SPSB3-210ENST00000568416 CYP2B6P20813 491 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 ZSCAN25Q6NSZ9 544 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 SLC44A5Q8NCS7 719 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 USP6NLQ92738 828 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 DYNLL2Q96FJ2 89 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 HTATIP2Q9BUP3 242 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 ECHDC1Q9NTX5 307 aa22.81■■□□□ 1.24
SPSB3-210ENST00000568416 MPHOSPH10O00566 681 aaKnown RBP22.8■■□□□ 1.24
SPSB3-210ENST00000568416 XRCC5P13010 732 aaKnown RBP22.8■■□□□ 1.24
SPSB3-210ENST00000568416 LBX2Q6XYB7 198 aa22.8■■□□□ 1.24
SPSB3-210ENST00000568416 GPR142Q7Z601 462 aa22.8■■□□□ 1.24
SPSB3-210ENST00000568416 DPF3Q92784 378 aa22.8■■□□□ 1.24
SPSB3-210ENST00000568416 RPTORQ8N122 1335 aa22.8■■□□□ 1.24
SPSB3-210ENST00000568416 MORN1Q5T089 497 aa22.79■■□□□ 1.24
SPSB3-210ENST00000568416 C12orf60Q5U649 245 aa22.79■■□□□ 1.24
SPSB3-210ENST00000568416 TMEM179Q6ZVK1 233 aa22.79■■□□□ 1.24
SPSB3-210ENST00000568416 PLEKHH3Q7Z736 793 aa22.79■■□□□ 1.24
SPSB3-210ENST00000568416 PUS7LQ9H0K6 701 aaKnown RBP22.79■■□□□ 1.24
SPSB3-210ENST00000568416 RPAP3Q9H6T3 665 aaPredicted RBP22.79■■□□□ 1.24
SPSB3-210ENST00000568416 HMX1Q9NP08 348 aaPredicted RBP22.79■■□□□ 1.24
SPSB3-210ENST00000568416 SMIM22K7EJ46 135 aa22.78■■□□□ 1.24
SPSB3-210ENST00000568416 MAP3K21Q5TCX8 1036 aa22.78■■□□□ 1.24
SPSB3-210ENST00000568416 CCAR1Q8IX12 1150 aaKnown RBP22.78■■□□□ 1.24
SPSB3-210ENST00000568416 COLQQ9Y215 455 aaPredicted RBP22.78■■□□□ 1.24
SPSB3-210ENST00000568416 CYP2D7A0A087X1C5 515 aa22.77■■□□□ 1.24
SPSB3-210ENST00000568416 SPDYE16A6NNV3 312 aaPredicted RBP22.77■■□□□ 1.24
SPSB3-210ENST00000568416 USP17L12C9JPN9 530 aa22.77■■□□□ 1.24
SPSB3-210ENST00000568416 USP17L21D6R901 530 aa22.77■■□□□ 1.24
SPSB3-210ENST00000568416 AKR1B1P15121 316 aa22.77■■□□□ 1.24
SPSB3-210ENST00000568416 CCNA1P78396 465 aa22.77■■□□□ 1.24
SPSB3-210ENST00000568416 TRMT44Q8IYL2 757 aaKnown RBP22.77■■□□□ 1.24
SPSB3-210ENST00000568416 BTBD7Q9P203 1132 aa22.77■■□□□ 1.24
SPSB3-210ENST00000568416 SLC4A4Q9Y6R1 1079 aa22.77■■□□□ 1.24
SPSB3-210ENST00000568416 DOCK3Q8IZD9 2030 aa22.76■■□□□ 1.23
SPSB3-210ENST00000568416 RGS2P41220 211 aa22.76■■□□□ 1.23
SPSB3-210ENST00000568416 CDK8P49336 464 aa22.76■■□□□ 1.23
SPSB3-210ENST00000568416 SIAH1Q8IUQ4 282 aa22.76■■□□□ 1.23
SPSB3-210ENST00000568416 CTR9Q6PD62 1173 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 C16orf86Q6ZW13 317 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 AMOTL1Q8IY63 956 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 KBTBD3Q8NAB2 608 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 ANKLE1Q8NAG6 615 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 DDRGK1Q96HY6 314 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 GPATCH3Q96I76 525 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 CCDC17Q96LX7 622 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 APBA2Q99767 749 aa22.75■■□□□ 1.23
SPSB3-210ENST00000568416 PRKAR2AP13861 404 aaKnown RBP22.74■■□□□ 1.23
SPSB3-210ENST00000568416 ZKSCAN1P17029 563 aaPredicted RBP22.74■■□□□ 1.23
SPSB3-210ENST00000568416 MAP2K5Q13163 448 aa22.74■■□□□ 1.23
SPSB3-210ENST00000568416 COG2Q14746 738 aa22.74■■□□□ 1.23
SPSB3-210ENST00000568416 KIAA1755Q5JYT7 1200 aa22.74■■□□□ 1.23
SPSB3-210ENST00000568416 CLEC10AQ8IUN9 316 aa22.74■■□□□ 1.23
SPSB3-210ENST00000568416 PAWRQ96IZ0 340 aaKnown RBP22.74■■□□□ 1.23
SPSB3-210ENST00000568416 STRBPQ96SI9 672 aaKnown RBP22.74■■□□□ 1.23
SPSB3-210ENST00000568416 PCDHB15Q9Y5E8 787 aa22.74■■□□□ 1.23
SPSB3-210ENST00000568416 GLRX3O76003 335 aaKnown RBP22.73■■□□□ 1.23
SPSB3-210ENST00000568416 PTPREP23469 700 aa22.73■■□□□ 1.23
SPSB3-210ENST00000568416 ICA1Q05084 483 aa22.73■■□□□ 1.23
SPSB3-210ENST00000568416 CACNB2Q08289 660 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms