RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 SRBD1Q8N5C6 995 aaKnown RBP20.89■□□□□ 0.93
SMPD3-211ENST00000568373 ANKS1AQ92625 1134 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 COA1Q9GZY4 146 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 KIAA1468Q9P260 1216 aa20.89■□□□□ 0.93
SMPD3-211ENST00000568373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.88■□□□□ 0.93
SMPD3-211ENST00000568373 hCG_1642624A0A1W2PR95 340 aa20.88■□□□□ 0.93
SMPD3-211ENST00000568373 MMP10P09238 476 aa20.88■□□□□ 0.93
SMPD3-211ENST00000568373 PDE6BP35913 854 aa20.88■□□□□ 0.93
SMPD3-211ENST00000568373 IQCB1Q15051 598 aa20.88■□□□□ 0.93
SMPD3-211ENST00000568373 CCDC178Q5BJE1 867 aa20.88■□□□□ 0.93
SMPD3-211ENST00000568373 TIGD1Q96MW7 591 aa20.88■□□□□ 0.93
SMPD3-211ENST00000568373 KAT14Q9H8E8 782 aa20.88■□□□□ 0.93
SMPD3-211ENST00000568373 SAP30BPQ9UHR5 308 aaKnown RBP20.88■□□□□ 0.93
SMPD3-211ENST00000568373 ALDH1B1P30837 517 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 KIF5BP33176 963 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 SYKP43405 635 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 RHBDL3P58872 404 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 GTF2IP78347 998 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 EZH2Q15910 746 aaKnown RBP20.87■□□□□ 0.93
SMPD3-211ENST00000568373 KRI1Q8N9T8 703 aaKnown RBP20.87■□□□□ 0.93
SMPD3-211ENST00000568373 ERCC4Q92889 916 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-211ENST00000568373 CLIC6Q96NY7 704 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 TCP11L1Q9NUJ3 509 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 PARP3Q9Y6F1 533 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 COL11A2P13942 1736 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-211ENST00000568373 RIMBP2O15034 1052 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 ZNF500O60304 480 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-211ENST00000568373 KRT2P35908 639 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 ZNF444Q8N0Y2 327 aaPredicted RBP20.87■□□□□ 0.93
SMPD3-211ENST00000568373 ZNF287Q9HBT7 754 aa20.87■□□□□ 0.93
SMPD3-211ENST00000568373 TSPY3P0CV98 308 aa20.86■□□□□ 0.93
SMPD3-211ENST00000568373 TSPY8P0CW00 308 aa20.86■□□□□ 0.93
SMPD3-211ENST00000568373 MPNDQ8N594 471 aa20.86■□□□□ 0.93
SMPD3-211ENST00000568373 SLC44A5Q8NCS7 719 aa20.86■□□□□ 0.93
SMPD3-211ENST00000568373 CABP5Q9NP86 173 aa20.86■□□□□ 0.93
SMPD3-211ENST00000568373 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.86■□□□□ 0.93
SMPD3-211ENST00000568373 FLT1P17948 1338 aa20.86■□□□□ 0.93
SMPD3-211ENST00000568373 BAZ2BQ9UIF8 2168 aaKnown RBP20.86■□□□□ 0.93
SMPD3-211ENST00000568373 PNMA1Q8ND90 353 aa20.85■□□□□ 0.93
SMPD3-211ENST00000568373 ZC3H12CQ9C0D7 883 aaKnown RBP20.85■□□□□ 0.93
SMPD3-211ENST00000568373 SUGT1Q9Y2Z0 365 aa20.85■□□□□ 0.93
SMPD3-211ENST00000568373 PCDHB6Q9Y5E3 794 aa20.85■□□□□ 0.93
SMPD3-211ENST00000568373 TNS1Q9HBL0 1735 aaKnown RBP20.85■□□□□ 0.93
SMPD3-211ENST00000568373 RASA1P20936 1047 aa20.85■□□□□ 0.93
SMPD3-211ENST00000568373 CEP57L1Q8IYX8 460 aa20.85■□□□□ 0.93
SMPD3-211ENST00000568373 MASTLQ96GX5 879 aa20.85■□□□□ 0.93
SMPD3-211ENST00000568373 CEP131Q9UPN4 1083 aa20.85■□□□□ 0.93
SMPD3-211ENST00000568373 A0A087WWV3 80 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 USP17L3A6NCW0 530 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 USP17L4A6NCW7 530 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 GOLGA6L19H0YKK7 550 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 PTPREP23469 700 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 OLFM4Q6UX06 510 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 DPP8Q6V1X1 898 aaPredicted RBP20.84■□□□□ 0.93
SMPD3-211ENST00000568373 C16orf86Q6ZW13 317 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 USP17L1Q7RTZ2 530 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 BRMS1Q9HCU9 246 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 FBXO2Q9UK22 296 aaPredicted RBP20.84■□□□□ 0.93
SMPD3-211ENST00000568373 MYH1P12882 1939 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 FOCADQ5VW36 1801 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 SCG2P13521 617 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 ZRSR1Q15695 479 aaKnown RBP20.84■□□□□ 0.93
SMPD3-211ENST00000568373 CAMKK2Q96RR4 588 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 NAT10Q9H0A0 1025 aaKnown RBP20.84■□□□□ 0.93
SMPD3-211ENST00000568373 DAGLAQ9Y4D2 1042 aa20.84■□□□□ 0.93
SMPD3-211ENST00000568373 NPY5RQ15761 445 aa20.83■□□□□ 0.93
SMPD3-211ENST00000568373 PFKFB3Q16875 520 aaPredicted RBP20.83■□□□□ 0.93
SMPD3-211ENST00000568373 MORC2Q9Y6X9 1032 aaPredicted RBP20.83■□□□□ 0.93
SMPD3-211ENST00000568373 SNED1Q8TER0 1413 aa20.83■□□□□ 0.92
SMPD3-211ENST00000568373 CDK8P49336 464 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 GRM4Q14833 912 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 PLA2G4DQ86XP0 818 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 TMX4Q9H1E5 349 aaPredicted RBP20.82■□□□□ 0.92
SMPD3-211ENST00000568373 KCNH3Q9ULD8 1083 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 QSER1Q2KHR3 1735 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 BECN2A8MW95 431 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 MSL1Q68DK7 614 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 DHX40Q8IX18 779 aaKnown RBP20.82■□□□□ 0.92
SMPD3-211ENST00000568373 ZNF579Q8NAF0 562 aaKnown RBP20.82■□□□□ 0.92
SMPD3-211ENST00000568373 TNFRSF25Q93038 417 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 TRIM5Q9C035 493 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 RGPD3A6NKT7 1758 aaPredicted RBP20.82■□□□□ 0.92
SMPD3-211ENST00000568373 RGPD4Q7Z3J3 1758 aa20.82■□□□□ 0.92
SMPD3-211ENST00000568373 FAM205CA6NFA0 338 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 TRIM75PA6NK02 468 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 GOLGA6L6A8MZA4 724 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 ATP2B1P20020 1258 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 ZNF75DP51815 510 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 EARS2Q5JPH6 523 aaKnown RBP20.81■□□□□ 0.92
SMPD3-211ENST00000568373 SARM1Q6SZW1 724 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 CERS5Q8N5B7 392 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 FBXW7Q969H0 707 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 SRPRBQ9Y5M8 271 aaKnown RBP20.81■□□□□ 0.92
SMPD3-211ENST00000568373 GNAQP50148 359 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 DPCR1Q3MIW9 517 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 SPC24Q8NBT2 197 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 EYA3Q99504 573 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 STX8Q9UNK0 236 aa20.81■□□□□ 0.92
SMPD3-211ENST00000568373 TPM3P06753 285 aa20.8■□□□□ 0.92
SMPD3-211ENST00000568373 GRIN1Q05586 938 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms