RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C1QTNF8P60827 252 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 RRP1BQ14684 758 aaKnown RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 RRP12Q5JTH9 1297 aaKnown RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 NOL9Q5SY16 702 aaKnown RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 AKNAD1Q5T1N1 836 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 CREB3L3Q68CJ9 461 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 MFSD6Q6ZSS7 791 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 SAPCD2Q86UD0 394 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 ZKSCAN4Q969J2 545 aaPredicted RBP13.59□□□□□ -0.23
KARS-207ENST00000566560 ZBTB21Q9ULJ3 1066 aa13.59□□□□□ -0.23
KARS-207ENST00000566560 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.23
KARS-207ENST00000566560 ORC4O43929 436 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 AKR1B1P15121 316 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 RASA1P20936 1047 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 NECTIN1Q15223 517 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 ABCB5Q2M3G0 1257 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 SHROOM1Q2M3G4 852 aaPredicted RBP13.58□□□□□ -0.24
KARS-207ENST00000566560 LDLRAD1Q5T700 205 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 CLMNQ96JQ2 1002 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 PICK1Q9NRD5 415 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 TACC3Q9Y6A5 838 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 SNCAIPQ9Y6H5 919 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 PTPRFP10586 1907 aa13.58□□□□□ -0.24
KARS-207ENST00000566560 MYH4Q9Y623 1939 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 UNCXA6NJT0 531 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 GH2P01242 217 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 ASNSP08243 561 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 FGRP09769 529 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
KARS-207ENST00000566560 HSPA4P34932 840 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 CCDC17Q96LX7 622 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 CABP5Q9NP86 173 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 INCENPQ9NQS7 918 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.57□□□□□ -0.24
KARS-207ENST00000566560 TAF6LQ9Y6J9 622 aa13.57□□□□□ -0.24
KARS-207ENST00000566560 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 E7EWF7 191 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 RANBP6O60518 1105 aaKnown RBP13.56□□□□□ -0.24
KARS-207ENST00000566560 TSPY3P0CV98 308 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 TSPY8P0CW00 308 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 HSPA6P17066 643 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 TRDNQ13061 729 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 STOX1Q6ZVD7 989 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 TMEM179Q6ZVK1 233 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 RALYLQ86SE5 291 aaKnown RBP13.56□□□□□ -0.24
KARS-207ENST00000566560 ZNF444Q8N0Y2 327 aaPredicted RBP13.56□□□□□ -0.24
KARS-207ENST00000566560 ESR2Q92731 530 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 KRT23Q9C075 422 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 CRISPLD2Q9H0B8 497 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 CNNM2Q9H8M5 875 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 GINM1Q9NU53 330 aa13.56□□□□□ -0.24
KARS-207ENST00000566560 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 SPDYE5A6NIY4 337 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 B4E1Z4 1266 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 NT5C2P49902 561 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 ZNF157P51786 506 aaPredicted RBP13.55□□□□□ -0.24
KARS-207ENST00000566560 JAG1P78504 1218 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
KARS-207ENST00000566560 ERO1BQ86YB8 467 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 RASAL3Q86YV0 1011 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 CLEC10AQ8IUN9 316 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 OTUD5Q96G74 571 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 HHIPL1Q96JK4 782 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 UPF2Q9HAU5 1272 aaKnown RBP13.55□□□□□ -0.24
KARS-207ENST00000566560 WDR70Q9NW82 654 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 LOC285556D6RIA3 1793 aa13.55□□□□□ -0.24
KARS-207ENST00000566560 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 KDM4AO75164 1064 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 PTPRAP18433 802 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 HTRA3P83110 453 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 TFAP4Q01664 338 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 ICA1Q05084 483 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 KRT32Q14532 448 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 SEPT2Q15019 361 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 NCOA7Q8NI08 942 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 AS3MTQ9HBK9 375 aa13.54□□□□□ -0.24
KARS-207ENST00000566560 USP17L5A8MUK1 530 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 SLC10A3P09131 477 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 GUCY1A2P33402 732 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 PPATQ06203 517 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 GRM1Q13255 1194 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 PPIL2Q13356 520 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 NKX2-3Q8TAU0 364 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 KCNB2Q92953 911 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 CEP95Q96GE4 821 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 FEZ1Q99689 392 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 BACH2Q9BYV9 841 aa13.53□□□□□ -0.24
KARS-207ENST00000566560 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms