RNA–Protein interactions for RNA: ENST00000564843.1

LINC01413-201, Transcript of long intergenic non-protein coding RNA 1413, humanhuman

TSL 3 BASIC

Gene LINC01413, Length 772 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01413-201ENST00000564843 CERKLQ49MI3 558 aaPredicted RBP20.31■□□□□ 0.84
LINC01413-201ENST00000564843 RPAP2Q8IXW5 612 aaPredicted RBP20.31■□□□□ 0.84
LINC01413-201ENST00000564843 CLASRPQ8N2M8 674 aaKnown RBP20.31■□□□□ 0.84
LINC01413-201ENST00000564843 LCORLQ8N3X6 602 aa20.31■□□□□ 0.84
LINC01413-201ENST00000564843 GPRC5AQ8NFJ5 357 aa20.31■□□□□ 0.84
LINC01413-201ENST00000564843 SDR42E1Q8WUS8 393 aa20.31■□□□□ 0.84
LINC01413-201ENST00000564843 C12orf42Q96LP6 360 aa20.31■□□□□ 0.84
LINC01413-201ENST00000564843 HTATIP2Q9BUP3 242 aa20.31■□□□□ 0.84
LINC01413-201ENST00000564843 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
LINC01413-201ENST00000564843 COL11A1P12107 1806 aaPredicted RBP20.31■□□□□ 0.84
LINC01413-201ENST00000564843 ZNFX1Q9P2E3 1918 aaKnown RBP20.31■□□□□ 0.84
LINC01413-201ENST00000564843 A0A0G2JMZ2 1700 aa20.3■□□□□ 0.84
LINC01413-201ENST00000564843 SMIM22K7EJ46 135 aa20.3■□□□□ 0.84
LINC01413-201ENST00000564843 MNX1P50219 401 aaPredicted RBP20.3■□□□□ 0.84
LINC01413-201ENST00000564843 TTF1Q15361 905 aaPredicted RBP20.3■□□□□ 0.84
LINC01413-201ENST00000564843 ABCB5Q2M3G0 1257 aa20.3■□□□□ 0.84
LINC01413-201ENST00000564843 TTC6Q86TZ1 520 aa20.3■□□□□ 0.84
LINC01413-201ENST00000564843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.3■□□□□ 0.84
LINC01413-201ENST00000564843 USP6NLQ92738 828 aa20.3■□□□□ 0.84
LINC01413-201ENST00000564843 PAWRQ96IZ0 340 aaKnown RBP20.3■□□□□ 0.84
LINC01413-201ENST00000564843 FEZ1Q99689 392 aa20.3■□□□□ 0.84
LINC01413-201ENST00000564843 RBM27Q9P2N5 1060 aaKnown RBP20.3■□□□□ 0.84
LINC01413-201ENST00000564843 IFIT2P09913 472 aaKnown RBP20.29■□□□□ 0.84
LINC01413-201ENST00000564843 MS4A1P11836 297 aa20.29■□□□□ 0.84
LINC01413-201ENST00000564843 CCL14Q16627 93 aa20.29■□□□□ 0.84
LINC01413-201ENST00000564843 SLC44A5Q8NCS7 719 aa20.29■□□□□ 0.84
LINC01413-201ENST00000564843 PRO3102Q9H379 93 aa20.29■□□□□ 0.84
LINC01413-201ENST00000564843 BOLA2Q9H3K6 86 aa20.29■□□□□ 0.84
LINC01413-201ENST00000564843 RCAN3Q9UKA8 241 aa20.29■□□□□ 0.84
LINC01413-201ENST00000564843 HMMRO75330 724 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 POLR3DP05423 398 aaPredicted RBP20.28■□□□□ 0.84
LINC01413-201ENST00000564843 VCAM1P19320 739 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 SEPT2Q15019 361 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 MAP3K21Q5TCX8 1036 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 TMED8Q6PL24 325 aaPredicted RBP20.28■□□□□ 0.84
LINC01413-201ENST00000564843 GPR142Q7Z601 462 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 NUDT12Q9BQG2 462 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 CRNKL1Q9BZJ0 848 aaKnown RBP20.28■□□□□ 0.84
LINC01413-201ENST00000564843 KIAA1683Q9H0B3 1180 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 ARMT1Q9H993 441 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 DCP1AQ9NPI6 582 aaPredicted RBP20.28■□□□□ 0.84
LINC01413-201ENST00000564843 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
LINC01413-201ENST00000564843 RPTORQ8N122 1335 aa20.27■□□□□ 0.84
LINC01413-201ENST00000564843 A0A1W2PRG0 241 aa20.27■□□□□ 0.84
LINC01413-201ENST00000564843 PRKAB2O43741 272 aa20.27■□□□□ 0.84
LINC01413-201ENST00000564843 MORN1Q5T089 497 aa20.27■□□□□ 0.84
LINC01413-201ENST00000564843 CATSPERGQ6ZRH7 1159 aa20.27■□□□□ 0.84
LINC01413-201ENST00000564843 HMX1Q9NP08 348 aaPredicted RBP20.27■□□□□ 0.84
LINC01413-201ENST00000564843 LAMA2P24043 3122 aaKnown RBP20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L15C9J2P7 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L13C9JLJ4 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L11C9JVI0 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L18D6R9N7 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L22D6RA61 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L17D6RBQ6 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L19D6RCP7 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L20D6RJB6 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 SMARCA5O60264 1052 aaPredicted RBP20.26■□□□□ 0.83
LINC01413-201ENST00000564843 RAB11FIP3O75154 756 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 PRKAR2AP13861 404 aaKnown RBP20.26■□□□□ 0.83
LINC01413-201ENST00000564843 MAPK4P31152 587 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 ADD2P35612 726 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 USP17L24Q0WX57 530 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 CLEC10AQ8IUN9 316 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 SOCS4Q8WXH5 440 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 PAG1Q9NWQ8 432 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 BTBD7Q9P203 1132 aa20.26■□□□□ 0.83
LINC01413-201ENST00000564843 MBD4O95243 580 aa20.25■□□□□ 0.83
LINC01413-201ENST00000564843 XRCC5P13010 732 aaKnown RBP20.25■□□□□ 0.83
LINC01413-201ENST00000564843 KIAA1755Q5JYT7 1200 aa20.25■□□□□ 0.83
LINC01413-201ENST00000564843 PLEKHH3Q7Z736 793 aa20.25■□□□□ 0.83
LINC01413-201ENST00000564843 RPAP3Q9H6T3 665 aaPredicted RBP20.25■□□□□ 0.83
LINC01413-201ENST00000564843 CABP5Q9NP86 173 aa20.25■□□□□ 0.83
LINC01413-201ENST00000564843 RABGAP1Q9Y3P9 1069 aa20.25■□□□□ 0.83
LINC01413-201ENST00000564843 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
LINC01413-201ENST00000564843 COL6A3P12111 3177 aa20.25■□□□□ 0.83
LINC01413-201ENST00000564843 CYP2D7A0A087X1C5 515 aa20.24■□□□□ 0.83
LINC01413-201ENST00000564843 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
LINC01413-201ENST00000564843 ATP5JP18859 108 aa20.24■□□□□ 0.83
LINC01413-201ENST00000564843 USP14P54578 494 aa20.24■□□□□ 0.83
LINC01413-201ENST00000564843 CACNB2Q08289 660 aaPredicted RBP20.24■□□□□ 0.83
LINC01413-201ENST00000564843 GTF3C2Q8WUA4 911 aaPredicted RBP20.24■□□□□ 0.83
LINC01413-201ENST00000564843 HAUS7Q99871 368 aa20.24■□□□□ 0.83
LINC01413-201ENST00000564843 NR2E3Q9Y5X4 410 aa20.24■□□□□ 0.83
LINC01413-201ENST00000564843 ZNF236Q9UL36 1845 aa20.23■□□□□ 0.83
LINC01413-201ENST00000564843 SMCHD1A6NHR9 2005 aa20.23■□□□□ 0.83
LINC01413-201ENST00000564843 MPHOSPH10O00566 681 aaKnown RBP20.23■□□□□ 0.83
LINC01413-201ENST00000564843 EVI5O60447 810 aa20.23■□□□□ 0.83
LINC01413-201ENST00000564843 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
LINC01413-201ENST00000564843 CCND3P30281 292 aaPredicted RBP20.23■□□□□ 0.83
LINC01413-201ENST00000564843 PDE3AQ14432 1141 aa20.23■□□□□ 0.83
LINC01413-201ENST00000564843 NECAB2Q7Z6G3 386 aa20.23■□□□□ 0.83
LINC01413-201ENST00000564843 FLRT1Q9NZU1 646 aa20.23■□□□□ 0.83
LINC01413-201ENST00000564843 OGDHLQ9ULD0 1010 aa20.23■□□□□ 0.83
LINC01413-201ENST00000564843 LBX2Q6XYB7 198 aa20.22■□□□□ 0.83
LINC01413-201ENST00000564843 SIAH1Q8IUQ4 282 aa20.22■□□□□ 0.83
LINC01413-201ENST00000564843 ANKLE1Q8NAG6 615 aa20.22■□□□□ 0.83
LINC01413-201ENST00000564843 APBA2Q99767 749 aa20.22■□□□□ 0.83
LINC01413-201ENST00000564843 PFASO15067 1338 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms