RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ANKRD2Q9GZV1 360 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 GREM2Q9H772 168 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 PRKAG2Q9UGJ0 569 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 OGDHLQ9ULD0 1010 aa6.85□□□□□ -1.31
HERC1-213ENST00000561359 SIAH2O43255 324 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 AP1G2O75843 785 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 FKBP1AP62942 108 aaKnown RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 MRPS5P82675 430 aaKnown RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 SMAD3P84022 425 aaKnown RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 ARID5BQ14865 1188 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 SHHQ15465 462 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 DCAF15Q66K64 600 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 ZNF804AQ7Z570 1209 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 DZIP1LQ8IYY4 767 aaKnown RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 CCDC191Q8NCU4 936 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 SMCR8Q8TEV9 937 aaPredicted RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 HOOK2Q96ED9 719 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 MPHOSPH8Q99549 860 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 MYD88Q99836 296 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 CWC25Q9NXE8 425 aaPredicted RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 THEGQ9P2T0 379 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 DBF4Q9UBU7 674 aaPredicted RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 TTF2Q9UNY4 1162 aaKnown RBP6.84□□□□□ -1.31
HERC1-213ENST00000561359 KCNH4Q9UQ05 1017 aa6.84□□□□□ -1.31
HERC1-213ENST00000561359 SNAP23O00161 211 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 INPP5BP32019 993 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
HERC1-213ENST00000561359 CACNB3P54284 484 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 MOGSQ13724 837 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 KRT24Q2M2I5 525 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 C9orf50Q5SZB4 431 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 GPAT2Q6NUI2 795 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 MIGA2Q7L4E1 593 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 BPHLQ86WA6 291 aaPredicted RBP6.83□□□□□ -1.32
HERC1-213ENST00000561359 TTLL11Q8NHH1 800 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
HERC1-213ENST00000561359 LRFN3Q9BTN0 628 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.83□□□□□ -1.32
HERC1-213ENST00000561359 ZNF341Q9BYN7 854 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 HYPKQ9NX55 129 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 DACH1Q9UI36 760 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 SERPINA10Q9UK55 444 aa6.83□□□□□ -1.32
HERC1-213ENST00000561359 MAPK8IP3Q9UPT6 1336 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 COL6A1P12109 1028 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 IL1R1P14778 569 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 CRKP46108 304 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 CHRNDQ07001 517 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 PDE3AQ14432 1141 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 GRIN2CQ14957 1233 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 MFSD14BQ5SR56 506 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 GADL1Q6ZQY3 521 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 FASTKD5Q7L8L6 764 aaKnown RBP6.82□□□□□ -1.32
HERC1-213ENST00000561359 ANKRD13CQ8N6S4 541 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 LRRN4Q8WUT4 740 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 NECAB3Q96P71 396 aaPredicted RBP6.82□□□□□ -1.32
HERC1-213ENST00000561359 BABAM1Q9NWV8 329 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 TMOD2Q9NZR1 351 aa6.82□□□□□ -1.32
HERC1-213ENST00000561359 MAGEB6P1A0A0J9YX57 407 aa6.81□□□□□ -1.32
HERC1-213ENST00000561359 CXCL11O14625 94 aa6.81□□□□□ -1.32
HERC1-213ENST00000561359 TAF5LO75529 589 aa6.81□□□□□ -1.32
HERC1-213ENST00000561359 TMEM31Q5JXX7 168 aa6.81□□□□□ -1.32
HERC1-213ENST00000561359 PPP2R2DQ66LE6 453 aa6.81□□□□□ -1.32
HERC1-213ENST00000561359 GAS2L1Q99501 681 aaPredicted RBP6.81□□□□□ -1.32
HERC1-213ENST00000561359 P2RX7Q99572 595 aaKnown RBP6.81□□□□□ -1.32
HERC1-213ENST00000561359 SENP6Q9GZR1 1112 aaPredicted RBP6.81□□□□□ -1.32
HERC1-213ENST00000561359 TIMELESSQ9UNS1 1208 aa6.81□□□□□ -1.32
HERC1-213ENST00000561359 LAS1LQ9Y4W2 734 aaKnown RBP6.81□□□□□ -1.32
HERC1-213ENST00000561359 DDX60LQ5H9U9 1706 aaKnown RBP6.81□□□□□ -1.32
HERC1-213ENST00000561359 ITGA6P23229 1130 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 MRE11P49959 708 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 RIPK4P57078 832 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 MYO9BQ13459 2157 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 CCDC85BQ15834 202 aaPredicted RBP6.8□□□□□ -1.32
HERC1-213ENST00000561359 C15orf52Q6ZUT6 534 aaKnown RBP6.8□□□□□ -1.32
HERC1-213ENST00000561359 PLEKHF1Q96S99 279 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 EPHX3Q9H6B9 360 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 ATP13A2Q9NQ11 1180 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 PRDM5Q9NQX1 630 aaPredicted RBP6.8□□□□□ -1.32
HERC1-213ENST00000561359 GMPR2Q9P2T1 348 aaKnown RBP6.8□□□□□ -1.32
HERC1-213ENST00000561359 ECM29Q5VYK3 1845 aa6.8□□□□□ -1.32
HERC1-213ENST00000561359 A0A0G2JLL6 359 aaPredicted RBP6.79□□□□□ -1.32
HERC1-213ENST00000561359 CAPN5O15484 640 aaPredicted RBP6.79□□□□□ -1.32
HERC1-213ENST00000561359 HOXB7P09629 217 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 CYP2B6P20813 491 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 PPP2R1AP30153 589 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 RTP1P59025 263 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 NNTQ13423 1086 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 NR6A1Q15406 480 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 FAM110CQ1W6H9 321 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 AKNAD1Q5T1N1 836 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 PRRT2Q7Z6L0 340 aaPredicted RBP6.79□□□□□ -1.32
HERC1-213ENST00000561359 FAM83AQ86UY5 434 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 TRIB2Q92519 343 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 BADQ92934 168 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 RNPC3Q96LT9 517 aaKnown RBP6.79□□□□□ -1.32
HERC1-213ENST00000561359 PNNQ9H307 717 aaKnown RBP6.79□□□□□ -1.32
HERC1-213ENST00000561359 ZNF576Q9H609 170 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 GOPCQ9HD26 462 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 ATP11BQ9Y2G3 1177 aa6.79□□□□□ -1.32
HERC1-213ENST00000561359 SLC45A1Q9Y2W3 748 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms