RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 AS3MTQ9HBK9 375 aa5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 ARNT2Q9HBZ2 717 aa5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 MRS2Q9HD23 443 aa5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 CHST12Q9NRB3 414 aa5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 PGAP2Q9UHJ9 254 aa5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 KNSTRNQ9Y448 316 aa5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 RNF114Q9Y508 228 aa5.34□□□□□ -1.55
HMGB3P26-201ENST00000560051 UNC13AQ9UPW8 1703 aa5.34□□□□□ -1.56
HMGB3P26-201ENST00000560051 FAM177BA6PVY3 158 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 SORBS3O60504 671 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 DIAPH1O60610 1272 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 PRMT3O60678 531 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 XYLBO75191 536 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 TRIM37O94972 964 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 TAL1P17542 331 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 DDIT3P35638 169 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 GP2P55259 537 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 PDE1CQ14123 709 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 SEPT7Q16181 437 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 ARSHQ5FYA8 562 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 HYIQ5T013 277 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 SYCP2LQ5T4T6 812 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 C1QTNF12Q5T7M4 302 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 CPLX2Q6PUV4 134 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 TMC7Q7Z402 723 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 WDR75Q8IWA0 830 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 IQCF2Q8IXL9 164 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 CMTR1Q8N1G2 835 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 NGDNQ8NEJ9 315 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 MAP3K14Q99558 947 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 CSRNP2Q9H175 543 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 C12orf49Q9H741 205 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 LGR6Q9HBX8 967 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 CHCHD3Q9NX63 227 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 CLIC5Q9NZA1 410 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 VTI1BQ9UEU0 232 aa5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 RTCBQ9Y3I0 505 aaKnown RBP5.33□□□□□ -1.56
HMGB3P26-201ENST00000560051 FAM25EA8MYX2 175 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 J3QW42 95 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 FOXO3O43524 673 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 NAT1P18440 290 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 DAB2P98082 770 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 FMR1Q06787 632 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 DPYDQ12882 1025 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 MTMR3Q13615 1198 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 FILIP1LQ4L180 1135 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 ZNF394Q53GI3 561 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 INO80DQ53TQ3 878 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 RELL1Q8IUW5 271 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 MYRIPQ8NFW9 859 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 GTF3C2Q8WUA4 911 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 ERCC4Q92889 916 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 HOMER2Q9NSB8 354 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 TMEM63CQ9P1W3 806 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 DIS3Q9Y2L1 958 aaKnown RBP5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 PCDHGB7Q9Y5F8 929 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 PPP2R3BQ9Y5P8 575 aa5.32□□□□□ -1.56
HMGB3P26-201ENST00000560051 GTPBP10A4D1E9 387 aaKnown RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 TMEM110-MUSTN1A8MSY1 372 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 LDHBP07195 334 aaKnown RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 MSL3P1P0C860 447 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 ZNF853P0CG23 659 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 CDC27P30260 824 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 ABCD1P33897 745 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 SH3BGRP55822 239 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 EXOSC10Q01780 885 aaKnown RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 FKBP4Q02790 459 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 MORC3Q14149 939 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 OCLNQ16625 522 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 GRAMD1BQ3KR37 738 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 RGL3Q3MIN7 710 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 TSHZ3Q63HK5 1081 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 FAM117BQ6P1L5 589 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 PDXDC1Q6P996 788 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 C16orf87Q6PH81 154 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 USP48Q86UV5 1035 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 C11orf74Q86VG3 221 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 VPS37DQ86XT2 251 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 PPHLN1Q8NEY8 458 aaKnown RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 SMCR8Q8TEV9 937 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 ZBTB10Q96DT7 871 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 ZNF496Q96IT1 587 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 PRIMPOLQ96LW4 560 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 NSUN5Q96P11 429 aaKnown RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 PDGFDQ9GZP0 370 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 DHX36Q9H2U1 1008 aaKnown RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 COMMD8Q9NX08 183 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 CXXC1Q9P0U4 656 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 EPS15L1Q9UBC2 864 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 SEPT3Q9UH03 358 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 EVLQ9UI08 416 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 XPO7Q9UIA9 1087 aaKnown RBP5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 GTF2A1LQ9UNN4 478 aa5.31□□□□□ -1.56
HMGB3P26-201ENST00000560051 DYTNA2CJ06 578 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 KLHL33A6NCF5 533 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 KIAA1324LA8MWY0 1029 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 PRRT4C9JH25 899 aa5.3□□□□□ -1.56
HMGB3P26-201ENST00000560051 CPLX1O14810 134 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms