RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 EHD4Q9H223 541 aa24.84■■□□□ 1.57
TSPAN3-206ENST00000559373 PORCNQ9H237 461 aa24.84■■□□□ 1.57
TSPAN3-206ENST00000559373 RLFQ13129 1914 aa24.84■■□□□ 1.57
TSPAN3-206ENST00000559373 COL11A1P12107 1806 aaPredicted RBP24.84■■□□□ 1.57
TSPAN3-206ENST00000559373 PRKAB2O43741 272 aa24.83■■□□□ 1.57
TSPAN3-206ENST00000559373 RAB11FIP3O75154 756 aa24.83■■□□□ 1.57
TSPAN3-206ENST00000559373 GUCY1A2P33402 732 aa24.83■■□□□ 1.57
TSPAN3-206ENST00000559373 SLC44A5Q8NCS7 719 aa24.83■■□□□ 1.57
TSPAN3-206ENST00000559373 PAG1Q9NWQ8 432 aa24.83■■□□□ 1.57
TSPAN3-206ENST00000559373 PARP14Q460N5 1801 aa24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 SMIM22K7EJ46 135 aa24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 MPHOSPH10O00566 681 aaKnown RBP24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 ERVK-9P63128 1117 aa24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 ERVK-24P63145 666 aa24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 SEPT2Q15019 361 aa24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 TRIB2Q92519 343 aa24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.82■■□□□ 1.564e-7■■■□□ 14.7
TSPAN3-206ENST00000559373 CABP5Q9NP86 173 aa24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 PAK6Q9NQU5 681 aaPredicted RBP24.82■■□□□ 1.56
TSPAN3-206ENST00000559373 HMGCRP04035 888 aa24.81■■□□□ 1.56
TSPAN3-206ENST00000559373 CCAR1Q8IX12 1150 aaKnown RBP24.81■■□□□ 1.56
TSPAN3-206ENST00000559373 DIS3LQ8TF46 1054 aaKnown RBP24.81■■□□□ 1.56
TSPAN3-206ENST00000559373 DYNLL2Q96FJ2 89 aa24.81■■□□□ 1.56
TSPAN3-206ENST00000559373 DCP1AQ9NPI6 582 aaPredicted RBP24.81■■□□□ 1.56
TSPAN3-206ENST00000559373 MBD4O95243 580 aa24.8■■□□□ 1.56
TSPAN3-206ENST00000559373 CHRDL2Q6WN34 429 aa24.8■■□□□ 1.56
TSPAN3-206ENST00000559373 CYP2D7A0A087X1C5 515 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 CNMDO75829 334 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 ATP5JP18859 108 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 VCAM1P19320 739 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 GABPAQ06546 454 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 CCL14Q16627 93 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 PAWRQ96IZ0 340 aaKnown RBP24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 NUDT12Q9BQG2 462 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 HTATIP2Q9BUP3 242 aa24.79■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L15C9J2P7 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L13C9JLJ4 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L11C9JVI0 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L18D6R9N7 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L22D6RA61 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L17D6RBQ6 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L19D6RCP7 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L20D6RJB6 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 ADD2P35612 726 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 USP17L24Q0WX57 530 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 WDR78Q5VTH9 848 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 CATSPERGQ6ZRH7 1159 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 GPR142Q7Z601 462 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 CLEC10AQ8IUN9 316 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 C12orf42Q96LP6 360 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 KIAA1683Q9H0B3 1180 aa24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 RANBP2P49792 3224 aaKnown RBP24.78■■□□□ 1.56
TSPAN3-206ENST00000559373 A0A1W2PRG0 241 aa24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 FXR1P51114 621 aaKnown RBP eCLIP24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 TMED8Q6PL24 325 aaPredicted RBP24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 HAUS7Q99871 368 aa24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 LRRCC1Q9C099 1032 aa24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 CRISPLD2Q9H0B8 497 aa24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 RPAP3Q9H6T3 665 aaPredicted RBP24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 HMX1Q9NP08 348 aaPredicted RBP24.77■■□□□ 1.56
TSPAN3-206ENST00000559373 CHMP4BQ9H444 224 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-206ENST00000559373 CWC22Q9HCG8 908 aaKnown RBP24.76■■□□□ 1.55
TSPAN3-206ENST00000559373 BTBD7Q9P203 1132 aa24.76■■□□□ 1.55
TSPAN3-206ENST00000559373 RPTORQ8N122 1335 aa24.76■■□□□ 1.55
TSPAN3-206ENST00000559373 MYH4Q9Y623 1939 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 PRKAR2AP13861 404 aaKnown RBP24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 MAPK4P31152 587 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 USP14P54578 494 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 PDE3AQ14432 1141 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 KIAA1755Q5JYT7 1200 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 TSHZ3Q63HK5 1081 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 PLEKHH3Q7Z736 793 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 SZT2Q5T011 3432 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 DNAH12Q6ZR08 3092 aa24.75■■□□□ 1.55
TSPAN3-206ENST00000559373 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.74■■□□□ 1.55
TSPAN3-206ENST00000559373 PCDH10Q9P2E7 1040 aa24.74■■□□□ 1.55
TSPAN3-206ENST00000559373 RBM27Q9P2N5 1060 aaKnown RBP24.74■■□□□ 1.55
TSPAN3-206ENST00000559373 RABGAP1Q9Y3P9 1069 aa24.74■■□□□ 1.55
TSPAN3-206ENST00000559373 EVI5O60447 810 aa24.73■■□□□ 1.55
TSPAN3-206ENST00000559373 AKR1B1P15121 316 aa24.73■■□□□ 1.55
TSPAN3-206ENST00000559373 CACNB2Q08289 660 aaPredicted RBP24.73■■□□□ 1.55
TSPAN3-206ENST00000559373 MORN1Q5T089 497 aa24.73■■□□□ 1.55
TSPAN3-206ENST00000559373 SAMD1Q6SPF0 538 aaPredicted RBP24.73■■□□□ 1.55
TSPAN3-206ENST00000559373 SOCS4Q8WXH5 440 aa24.73■■□□□ 1.55
TSPAN3-206ENST00000559373 USP6NLQ92738 828 aa24.73■■□□□ 1.55
TSPAN3-206ENST00000559373 A0A0G2JMZ2 1700 aa24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 SPDYE16A6NNV3 312 aaPredicted RBP24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 USP17L12C9JPN9 530 aa24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 USP17L21D6R901 530 aa24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 ZKSCAN1P17029 563 aaPredicted RBP24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 CCND3P30281 292 aaPredicted RBP24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 STK11IPQ8N1F8 1099 aa24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 PUS7LQ9H0K6 701 aaKnown RBP24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 SLC4A4Q9Y6R1 1079 aa24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 SMCHD1A6NHR9 2005 aa24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 PLXNA1Q9UIW2 1896 aa24.72■■□□□ 1.55
TSPAN3-206ENST00000559373 RGS2P41220 211 aa24.71■■□□□ 1.55
TSPAN3-206ENST00000559373 NECAB2Q7Z6G3 386 aa24.71■■□□□ 1.55
TSPAN3-206ENST00000559373 GTF3C2Q8WUA4 911 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms