RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 NOL10Q9BSC4 688 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 ZBTB21Q9ULJ3 1066 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 MAST2Q6P0Q8 1798 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 CYP2E1P05181 493 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 MAPK4P31152 587 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 GPR142Q7Z601 462 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 TDHQ8IZJ6 230 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 PAGR1Q9BTK6 254 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 UBE2OQ9C0C9 1292 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 PIH1D3Q9NQM4 214 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 MTMR10Q9NXD2 777 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 MYH1P12882 1939 aa13.57□□□□□ -0.24
RABGGTA-204ENST00000558376 PLCG2P16885 1265 aa13.56□□□□□ -0.24
RABGGTA-204ENST00000558376 LRRC26Q2I0M4 334 aa13.56□□□□□ -0.24
RABGGTA-204ENST00000558376 PLEKHH3Q7Z736 793 aa13.56□□□□□ -0.24
RABGGTA-204ENST00000558376 CRACR2BQ8N4Y2 399 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-204ENST00000558376 GINM1Q9NU53 330 aa13.56□□□□□ -0.24
RABGGTA-204ENST00000558376 FRMPD3Q5JV73 1810 aa13.56□□□□□ -0.24
RABGGTA-204ENST00000558376 CNMDO75829 334 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 RGS2P41220 211 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 TNNI3KQ59H18 835 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 TTC39AQ5SRH9 613 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 GPR108Q9NPR9 543 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 STXBP5LQ9Y2K9 1186 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 FPGT-TNNI3KV9GXZ4 949 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 GH2P01242 217 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 ZAP70P43403 619 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 POLA2Q14181 598 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 NDUFB9Q9Y6M9 179 aa13.55□□□□□ -0.24
RABGGTA-204ENST00000558376 DNAH12Q6ZR08 3092 aa13.54□□□□□ -0.24
RABGGTA-204ENST00000558376 HMMRO75330 724 aa13.54□□□□□ -0.24
RABGGTA-204ENST00000558376 MDM2Q00987 491 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 MAP2K5Q13163 448 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 CCDC158Q5M9N0 1113 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 CCAR1Q8IX12 1150 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 SSH3Q8TE77 659 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 GTF3C2Q8WUA4 911 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 APBA2Q99767 749 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 SURF6O75683 361 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 CYP7A1P22680 504 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 ZYXQ15942 572 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 ACER1Q8TDN7 264 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 ZNF512BQ96KM6 892 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 C12orf42Q96LP6 360 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 RABGAP1Q9Y3P9 1069 aa13.53□□□□□ -0.24
RABGGTA-204ENST00000558376 USP17L15C9J2P7 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L13C9JLJ4 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L11C9JVI0 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L18D6R9N7 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L22D6RA61 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L17D6RBQ6 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L19D6RCP7 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L20D6RJB6 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 HLA-DOAP06340 250 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 USP17L24Q0WX57 530 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 TATDN1Q6P1N9 297 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 CATSPERGQ6ZRH7 1159 aa13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 RBM19Q9Y4C8 960 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-204ENST00000558376 BTBD7Q9P203 1132 aa13.51□□□□□ -0.25
RABGGTA-204ENST00000558376 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
RABGGTA-204ENST00000558376 SLC15A5A6NIM6 579 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 PTPREP23469 700 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 OS9Q13438 667 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 NPLOC4Q8TAT6 608 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 SENP6Q9GZR1 1112 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 CCDC8Q9H0W5 538 aaPredicted RBP13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 LAMA2P24043 3122 aaKnown RBP13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 WDR78Q5VTH9 848 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 MFSD14CQ5VZR4 134 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 FEZ1Q99689 392 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 BACH2Q9BYV9 841 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 KIAA1683Q9H0B3 1180 aa13.5□□□□□ -0.25
RABGGTA-204ENST00000558376 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 IGSF3O75054 1194 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 GLRX3O76003 335 aaKnown RBP13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 IGHA2P01877 340 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 VCAM1P19320 739 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 USP5P45974 858 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 CCNA1P78396 465 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
RABGGTA-204ENST00000558376 ANTXR1Q9H6X2 564 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms