RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 TAB3Q8N5C8 712 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SNX24Q9Y343 169 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 SLC39A14Q15043 492 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 VWA3BQ502W6 1294 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 CCDC62Q6P9F0 684 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 IFIH1Q9BYX4 1025 aaKnown RBP4.08□□□□□ -1.76
ATXN3-248ENST00000558190 KAT14Q9H8E8 782 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 TEKT2Q9UIF3 430 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 ELP1O95163 1332 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 USP27XA6NNY8 438 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 GNAT3A8MTJ3 354 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 PPP2R5CQ13362 524 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 COQ7Q99807 217 aa4.08□□□□□ -1.76
ATXN3-248ENST00000558190 I3L4J1 428 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 GFAPP14136 432 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ADAM9Q13443 819 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PANX2Q96RD6 677 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TRIM56Q9BRZ2 755 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CD2BP2O95400 341 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 DMPKQ09013 629 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 JPH4Q96JJ6 628 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PBKQ96KB5 322 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 LRRC1Q9BTT6 524 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 RGL1Q9NZL6 768 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 A0A1W2PQ27 194 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 A0A1W2PQ64 194 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 A0A1W2PQD8 194 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 VWA3AA6NCI4 1184 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TDRD7Q8NHU6 1098 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CARD9Q9H257 536 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 HDAC6Q9UBN7 1215 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PA2G4Q9UQ80 394 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 DAAM1Q9Y4D1 1078 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CYP7A1P22680 504 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ELF1P32519 619 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 RTN1Q16799 776 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 FYB2Q5VWT5 728 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 MYD88Q99836 296 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 FAM207AQ9NSI2 230 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 GAS8O95995 478 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 UBA5Q9GZZ9 404 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 METTL24Q5JXM2 366 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 KSR2Q6VAB6 950 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TAOK1Q7L7X3 1001 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 KRT23Q9C075 422 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 SAMSN1Q9NSI8 373 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TPD52P55327 224 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 RIC8AQ9NPQ8 531 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 GYG2O15488 501 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TRIM37O94972 964 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 BEND3Q5T5X7 828 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 SIX6OS1Q8N1H7 587 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 MTMR3Q13615 1198 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ASIC2Q16515 512 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 LCA5Q86VQ0 697 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PROSER2Q86WR7 435 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 EIF2AQ9BY44 585 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 BRWD1Q9NSI6 2320 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 BACH1O14867 736 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CYLC2Q14093 348 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CRYMQ14894 314 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ATP2A3Q93084 1043 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PLAAQ9Y263 795 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ATP5DP30049 168 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 LIN9Q5TKA1 542 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 MPRIPQ6WCQ1 1025 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 MEIS3Q99687 375 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 RNF14Q9UBS8 474 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TSKSQ9UJT2 592 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 RBM5P52756 815 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ANKRD20A4Q4UJ75 823 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ANKRD20A8PQ5CZ79 823 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ANKRD20A2Q5SQ80 823 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ANKRD20A1Q5TYW2 823 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CCHCR1Q8TD31 782 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 SLC40A1Q9NP59 571 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 MDH1P40925 334 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CEP70Q8NHQ1 597 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TMEM165Q9HC07 324 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TRPC3Q13507 836 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 DMRT2Q9Y5R5 561 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 METAP2P50579 478 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 APBA1Q02410 837 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 LRRC8CQ8TDW0 803 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 SEC63Q9UGP8 760 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 EEF1DP29692 281 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 MOV10L1Q9BXT6 1211 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 DHX29Q7Z478 1369 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 H2AFZP0C0S5 128 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 H2AFVQ71UI9 128 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 ARHGAP24Q8N264 748 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 DPH5Q9H2P9 285 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 Q4G0T1 1027 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 FAM210AQ96ND0 272 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 TM6SF1Q9BZW5 370 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 PCYT1AP49585 367 aa4.07□□□□□ -1.76
ATXN3-248ENST00000558190 NOP14P78316 857 aaKnown RBP4.07□□□□□ -1.76
ATXN3-248ENST00000558190 CNKSR2Q8WXI2 1034 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms