RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 AK2P54819 239 aa14.54□□□□□ -0.08
TPM1-209ENST00000558072 EVCP57679 992 aa14.54□□□□□ -0.08
TPM1-209ENST00000558072 CPLX2Q6PUV4 134 aaKnown RBP14.54□□□□□ -0.08
TPM1-209ENST00000558072 CATIPQ7Z7H3 387 aa14.54□□□□□ -0.08
TPM1-209ENST00000558072 CLEC10AQ8IUN9 316 aa14.54□□□□□ -0.08
TPM1-209ENST00000558072 SLC12A7Q9Y666 1083 aa14.54□□□□□ -0.08
TPM1-209ENST00000558072 DOCK1Q14185 1865 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 TNKSO95271 1327 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 MPHOSPH10O00566 681 aaKnown RBP14.53□□□□□ -0.08
TPM1-209ENST00000558072 TTLL1O95922 423 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 HSP90AA1P07900 732 aaKnown RBP14.53□□□□□ -0.08
TPM1-209ENST00000558072 IREB2P48200 963 aaKnown RBP14.53□□□□□ -0.08
TPM1-209ENST00000558072 CYB5R4Q7L1T6 521 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 IGDCC4Q8TDY8 1250 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 BRF1Q92994 677 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 MAP3K14Q99558 947 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 KAT14Q9H8E8 782 aa14.53□□□□□ -0.08
TPM1-209ENST00000558072 DDAH1O94760 285 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 CELF2O95319 508 aaKnown RBP14.52□□□□□ -0.09
TPM1-209ENST00000558072 TOP1P11387 765 aaKnown RBP14.52□□□□□ -0.09
TPM1-209ENST00000558072 PDIA4P13667 645 aaKnown RBP14.52□□□□□ -0.09
TPM1-209ENST00000558072 CPA1P15085 419 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 INPP5BP32019 993 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 CAP2P40123 477 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 ANTXR2P58335 489 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 FKBP1BP68106 108 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 FAM47AQ5JRC9 791 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 ARMC9Q7Z3E5 817 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 IPO9Q96P70 1041 aaKnown RBP14.52□□□□□ -0.09
TPM1-209ENST00000558072 SLKQ9H2G2 1235 aaPredicted RBP14.52□□□□□ -0.09
TPM1-209ENST00000558072 ARHGEF10LQ9HCE6 1279 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 NYAP2Q9P242 653 aa14.52□□□□□ -0.09
TPM1-209ENST00000558072 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.52□□□□□ -0.09
TPM1-209ENST00000558072 PASKQ96RG2 1323 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 ZBTB43O43298 467 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 CDKL5O76039 1030 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 AKR1B1P15121 316 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 KIF5BP33176 963 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 NOVP48745 357 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 TOB2Q14106 344 aaPredicted RBP14.51□□□□□ -0.09
TPM1-209ENST00000558072 TTLL12Q14166 644 aaPredicted RBP14.51□□□□□ -0.09
TPM1-209ENST00000558072 SEC23AQ15436 765 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 CST9Q5W186 159 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 ENAHQ8N8S7 591 aaPredicted RBP14.51□□□□□ -0.09
TPM1-209ENST00000558072 SMC1BQ8NDV3 1235 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 INTS4Q96HW7 963 aaKnown RBP14.51□□□□□ -0.09
TPM1-209ENST00000558072 CLMNQ96JQ2 1002 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 AS3MTQ9HBK9 375 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 PICK1Q9NRD5 415 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 MTMR4Q9NYA4 1195 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 ZNF112Q9UJU3 913 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 STX8Q9UNK0 236 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 KIF3AQ9Y496 699 aa14.51□□□□□ -0.09
TPM1-209ENST00000558072 GREB1LQ9C091 1923 aaPredicted RBP14.51□□□□□ -0.09
TPM1-209ENST00000558072 KLF18A0A0U1RQI7 1052 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 UBE2Q2LH0YL09 131 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 USP2O75604 605 aaPredicted RBP14.5□□□□□ -0.09
TPM1-209ENST00000558072 TOMM70O94826 608 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 GNAQP50148 359 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 CHST3Q7LGC8 479 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 RBM46Q8TBY0 533 aaKnown RBP14.5□□□□□ -0.09
TPM1-209ENST00000558072 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 ZKSCAN4Q969J2 545 aaPredicted RBP14.5□□□□□ -0.09
TPM1-209ENST00000558072 MKL1Q969V6 931 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 TCEANC2Q96MN5 208 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 RBM28Q9NW13 759 aaKnown RBP14.5□□□□□ -0.09
TPM1-209ENST00000558072 CSADQ9Y600 493 aa14.5□□□□□ -0.09
TPM1-209ENST00000558072 IGKV6D-41A0A0C4DH26 115 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 PHF20L1A8MW92 1017 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 NMT2O60551 498 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 MAP3K9P80192 1104 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 HTRA3P83110 453 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 ICA1Q05084 483 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 NOL9Q5SY16 702 aaKnown RBP14.49□□□□□ -0.09
TPM1-209ENST00000558072 RCSD1Q6JBY9 416 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 SCYL3Q8IZE3 742 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 CTCFLQ8NI51 663 aaPredicted RBP14.49□□□□□ -0.09
TPM1-209ENST00000558072 KLRG1Q96E93 195 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 CEP95Q96GE4 821 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 TMX3Q96JJ7 454 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 WRNIP1Q96S55 665 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 LZTS2Q9BRK4 669 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 ZKSCAN3Q9BRR0 538 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 LLPHQ9BRT6 129 aaKnown RBP14.49□□□□□ -0.09
TPM1-209ENST00000558072 LRRC2Q9BYS8 371 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 CWC22Q9HCG8 908 aaKnown RBP14.49□□□□□ -0.09
TPM1-209ENST00000558072 ZBTB21Q9ULJ3 1066 aa14.49□□□□□ -0.09
TPM1-209ENST00000558072 NAP1L2Q9ULW6 460 aaPredicted RBP14.49□□□□□ -0.09
TPM1-209ENST00000558072 PHIPQ8WWQ0 1821 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 USP17L5A8MUK1 530 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 CPLX1O14810 134 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 PFKFB2O60825 505 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 GH2P01242 217 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 METAP2P50579 478 aaKnown RBP eCLIP14.48□□□□□ -0.09
TPM1-209ENST00000558072 APOBRQ0VD83 1088 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 RAB3GAP1Q15042 981 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 MAP3K11Q16584 847 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 APOA5Q6Q788 366 aa14.48□□□□□ -0.09
TPM1-209ENST00000558072 ANKRD13AQ8IZ07 590 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms