RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-227ENST00000557554 OLFML2BQ68BL8 750 aa12.51□□□□□ -0.41
ABCD4-227ENST00000557554 METTL16Q86W50 562 aaKnown RBP12.51□□□□□ -0.41
ABCD4-227ENST00000557554 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
ABCD4-227ENST00000557554 KHSRPQ92945 711 aaKnown RBP eCLIP12.51□□□□□ -0.41
ABCD4-227ENST00000557554 GNL3LQ9NVN8 582 aaKnown RBP12.51□□□□□ -0.41
ABCD4-227ENST00000557554 HERC5Q9UII4 1024 aaKnown RBP12.51□□□□□ -0.41
ABCD4-227ENST00000557554 PHF24Q9UPV7 400 aa12.51□□□□□ -0.41
ABCD4-227ENST00000557554 IL16Q14005 1332 aa12.51□□□□□ -0.41
ABCD4-227ENST00000557554 ASNSP08243 561 aa12.5□□□□□ -0.41
ABCD4-227ENST00000557554 KCNQ1P51787 676 aa12.5□□□□□ -0.41
ABCD4-227ENST00000557554 SLC4A10Q6U841 1118 aa12.5□□□□□ -0.41
ABCD4-227ENST00000557554 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
ABCD4-227ENST00000557554 ZGPATQ8N5A5 531 aaKnown RBP12.5□□□□□ -0.41
ABCD4-227ENST00000557554 BTBD7Q9P203 1132 aa12.5□□□□□ -0.41
ABCD4-227ENST00000557554 MROH7-TTC4A0A0A0MT08 1334 aa12.5□□□□□ -0.41
ABCD4-227ENST00000557554 SIPA1L1O43166 1804 aa12.5□□□□□ -0.41
ABCD4-227ENST00000557554 FANCIQ9NVI1 1328 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 MAP4K4O95819 1239 aaPredicted RBP12.49□□□□□ -0.41
ABCD4-227ENST00000557554 IGFBP4P22692 258 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 CCNA1P78396 465 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 MECOMQ03112 1051 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 TMEM240Q5SV17 173 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 ANKRD33Q7Z3H0 272 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 TOX2Q96NM4 488 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 DNAJC18Q9H819 358 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 TMEM39AQ9NV64 488 aa12.49□□□□□ -0.41
ABCD4-227ENST00000557554 PDS5AQ29RF7 1337 aaKnown RBP12.48□□□□□ -0.41
ABCD4-227ENST00000557554 TLL1O43897 1013 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 TIMP1P01033 207 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 EXOSC9Q06265 439 aaKnown RBP12.48□□□□□ -0.41
ABCD4-227ENST00000557554 RASGRF1Q13972 1273 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 ATP2B3Q16720 1220 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 FAM47AQ5JRC9 791 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 CATSPERGQ6ZRH7 1159 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 DZIP1Q86YF9 867 aaKnown RBP12.48□□□□□ -0.41
ABCD4-227ENST00000557554 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 PRKRIP1Q9H875 184 aaPredicted RBP12.48□□□□□ -0.41
ABCD4-227ENST00000557554 PI4KBQ9UBF8 816 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 ABCF2Q9UG63 623 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 TRANK1O15050 2925 aa12.48□□□□□ -0.41
ABCD4-227ENST00000557554 ERC2O15083 957 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 COBLO75128 1261 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 MYCNP04198 464 aaPredicted RBP12.47□□□□□ -0.41
ABCD4-227ENST00000557554 MRE11P49959 708 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 AAK1Q2M2I8 961 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 MFSD5Q6N075 450 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L2Q6R6M4 530 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 USP44Q9H0E7 712 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 GINM1Q9NU53 330 aa12.47□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 PI4K2BG5E9Z4 385 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 STRNO43815 780 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 PQBP1O60828 265 aaKnown RBP12.46□□□□□ -0.41
ABCD4-227ENST00000557554 ADORA2AP29274 412 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 ADORA1P30542 326 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 WDR78Q5VTH9 848 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.41
ABCD4-227ENST00000557554 CCDC129Q6ZRS4 1044 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 FOXP4Q8IVH2 680 aaPredicted RBP12.46□□□□□ -0.41
ABCD4-227ENST00000557554 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
ABCD4-227ENST00000557554 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
ABCD4-227ENST00000557554 TBX21Q9UL17 535 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 IVNS1ABPQ9Y6Y0 642 aa12.46□□□□□ -0.41
ABCD4-227ENST00000557554 PRRC2BQ5JSZ5 2229 aaKnown RBP12.46□□□□□ -0.42
ABCD4-227ENST00000557554 GBF1Q92538 1859 aa12.46□□□□□ -0.42
ABCD4-227ENST00000557554 A0A1W2PQ45 241 aaPredicted RBP12.45□□□□□ -0.42
ABCD4-227ENST00000557554 A0A1W2PQY0 241 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 CIAO1O76071 339 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 POU3F3P20264 500 aaPredicted RBP12.45□□□□□ -0.42
ABCD4-227ENST00000557554 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
ABCD4-227ENST00000557554 ZNF365Q70YC5 407 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 DPP9Q86TI2 863 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 HERVK_113Q902F9 699 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 NSUN4Q96CB9 384 aaKnown RBP12.45□□□□□ -0.42
ABCD4-227ENST00000557554 DHX36Q9H2U1 1008 aaKnown RBP12.45□□□□□ -0.42
ABCD4-227ENST00000557554 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 ZBTB21Q9ULJ3 1066 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 YBX2Q9Y2T7 364 aaKnown RBP12.45□□□□□ -0.42
ABCD4-227ENST00000557554 ZNF236Q9UL36 1845 aa12.45□□□□□ -0.42
ABCD4-227ENST00000557554 FAM86C2PA6NEL3 165 aa12.44□□□□□ -0.42
ABCD4-227ENST00000557554 GDF11O95390 407 aa12.44□□□□□ -0.42
ABCD4-227ENST00000557554 CSF2RAP15509 400 aa12.44□□□□□ -0.42
ABCD4-227ENST00000557554 NKX2-4Q9H2Z4 354 aa12.44□□□□□ -0.42
ABCD4-227ENST00000557554 CD320Q9NPF0 282 aa12.44□□□□□ -0.42
ABCD4-227ENST00000557554 MSRAQ9UJ68 235 aa12.44□□□□□ -0.42
ABCD4-227ENST00000557554 ZNFX1Q9P2E3 1918 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms