RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PSMG3-AS1Q96PY0 264 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 PHAXQ9H814 394 aaKnown RBP7.78□□□□□ -1.16
SYNE2-210ENST00000553455 ZNF214Q9UL59 606 aaPredicted RBP7.78□□□□□ -1.16
SYNE2-210ENST00000553455 PCDHB10Q9UN67 800 aa7.78□□□□□ -1.16
SYNE2-210ENST00000553455 KRBA1A5PL33 1030 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 PDPK1O15530 556 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 DDAH1O94760 285 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 USP11P51784 963 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 VHLLQ6RSH7 139 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 SEZ6L2Q6UXD5 910 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 TXNRD3Q86VQ6 643 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 PPFIBP1Q86W92 1011 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 XAGE3Q8WTP9 111 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 MYRFLQ96LU7 910 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 CCDC74BQ96LY2 380 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 SLC6A18Q96N87 628 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 SSU72Q9NP77 194 aaKnown RBP7.77□□□□□ -1.17
SYNE2-210ENST00000553455 DAGLAQ9Y4D2 1042 aa7.77□□□□□ -1.17
SYNE2-210ENST00000553455 MRPL42Q9Y6G3 142 aaKnown RBP7.77□□□□□ -1.17
SYNE2-210ENST00000553455 COL17A1Q9UMD9 1497 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-210ENST00000553455 NFICP08651 508 aa7.76□□□□□ -1.17
SYNE2-210ENST00000553455 DNAJB8Q8NHS0 232 aa7.76□□□□□ -1.17
SYNE2-210ENST00000553455 SSBP4Q9BWG4 385 aaPredicted RBP7.76□□□□□ -1.17
SYNE2-210ENST00000553455 BMP3P12645 472 aa7.75□□□□□ -1.17
SYNE2-210ENST00000553455 CHRNA4P43681 627 aa7.75□□□□□ -1.17
SYNE2-210ENST00000553455 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
SYNE2-210ENST00000553455 NCAPHQ15003 741 aa7.75□□□□□ -1.17
SYNE2-210ENST00000553455 SDE2Q6IQ49 451 aa7.75□□□□□ -1.17
SYNE2-210ENST00000553455 MFSD2AQ8NA29 543 aa7.75□□□□□ -1.17
SYNE2-210ENST00000553455 UTP4Q969X6 686 aaKnown RBP7.75□□□□□ -1.17
SYNE2-210ENST00000553455 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
SYNE2-210ENST00000553455 DNAJC7Q99615 494 aa7.75□□□□□ -1.17
SYNE2-210ENST00000553455 SUCOQ9UBS9 1254 aaKnown RBP7.75□□□□□ -1.17
SYNE2-210ENST00000553455 C9IYK1 514 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 MAP4P27816 1152 aaKnown RBP7.74□□□□□ -1.17
SYNE2-210ENST00000553455 GBP1P32455 592 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 SLC7A5Q01650 507 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 KIAA1211LQ6NV74 962 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 FAM20CQ8IXL6 584 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 LILRB2Q8N423 598 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 KANSL2Q9H9L4 492 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
SYNE2-210ENST00000553455 SLITRK5O94991 958 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 GNPTABQ3T906 1256 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 TDRD10Q5VZ19 366 aaKnown RBP7.73□□□□□ -1.17
SYNE2-210ENST00000553455 CD163Q86VB7 1156 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 RIN3Q8TB24 985 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 DHRS1Q96LJ7 313 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 MIPEPQ99797 713 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 YIPF2Q9BWQ6 316 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.73□□□□□ -1.17
SYNE2-210ENST00000553455 C1GALT1Q9NS00 363 aa7.73□□□□□ -1.17
SYNE2-210ENST00000553455 RBAK-RBAKDNI3L0D1 243 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 SUSD5O60279 629 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 CLEC3AO75596 197 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 IFRD2Q12894 506 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-210ENST00000553455 CDK5R2Q13319 367 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 MAP7Q14244 749 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 MTERF2Q49AM1 385 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 LETMD1Q6P1Q0 360 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 SPATC1Q76KD6 591 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 ST13P5Q8NFI4 369 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-210ENST00000553455 VWCEQ96DN2 955 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 DCAF5Q96JK2 942 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 SUSD2Q9UGT4 822 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 CEP131Q9UPN4 1083 aa7.72□□□□□ -1.17
SYNE2-210ENST00000553455 FAM95CA0A1B0GW59 222 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 DIAPH1O60610 1272 aaKnown RBP7.71□□□□□ -1.18
SYNE2-210ENST00000553455 SLC10A6Q3KNW5 377 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 BBS9Q3SYG4 887 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 AXDND1Q5T1B0 1012 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-210ENST00000553455 EEPD1Q7L9B9 569 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 SH3TC2Q8TF17 1288 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 ZNF669Q96BR6 464 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-210ENST00000553455 ZNF512BQ96KM6 892 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-210ENST00000553455 PRDM10Q9NQV6 1147 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 FAM86C1Q9NVL1 165 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 ZMYM5Q9UJ78 669 aa7.71□□□□□ -1.18
SYNE2-210ENST00000553455 C1QTNF9BB2RNN3 333 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 CBFA2T2O43439 604 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 RXRBP28702 533 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 TCEAL1Q15170 157 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 NBPF12Q5TAG4 269 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-210ENST00000553455 CDH24Q86UP0 819 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 JMYQ8N9B5 988 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 SMARCC1Q92922 1105 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-210ENST00000553455 KREMEN1Q96MU8 473 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 PFDN2Q9UHV9 154 aa7.7□□□□□ -1.18
SYNE2-210ENST00000553455 RNF225M0QZC1 329 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-210ENST00000553455 ENPP3O14638 875 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 SHOXO15266 292 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 EOMESO95936 686 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 TP53P04637 393 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-210ENST00000553455 CANXP27824 592 aaKnown RBP7.69□□□□□ -1.18
SYNE2-210ENST00000553455 EGFLAMQ63HQ2 1017 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 BEND4Q6ZU67 534 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 TOP6BLQ8N6T0 577 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 GATA6Q92908 595 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 HAUS7Q99871 368 aa7.69□□□□□ -1.18
SYNE2-210ENST00000553455 DUSP23Q9BVJ7 150 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms