RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 CYP2D7A0A087X1C5 515 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
GCN1-208ENST00000551549 GJA8P48165 433 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 RRP1P56182 461 aaKnown RBP11.74□□□□□ -0.53
GCN1-208ENST00000551549 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 C12orf42Q96LP6 360 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 PAGR1Q9BTK6 254 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 KIAA1683Q9H0B3 1180 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 PUS7LQ9H0K6 701 aaKnown RBP11.74□□□□□ -0.53
GCN1-208ENST00000551549 ATP8A2Q9NTI2 1148 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
GCN1-208ENST00000551549 MYH1P12882 1939 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 DOCK3Q8IZD9 2030 aa11.74□□□□□ -0.53
GCN1-208ENST00000551549 A0A1W2PRG0 241 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 USP17L12C9JPN9 530 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 USP17L21D6R901 530 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 CNMDO75829 334 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 VCAM1P19320 739 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 USP14P54578 494 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 ERVK-9P63128 1117 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 ERVK-24P63145 666 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 TRIM32Q13049 653 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 ZSCAN25Q6NSZ9 544 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 CATSPERGQ6ZRH7 1159 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 SLC4A4Q9Y6R1 1079 aa11.73□□□□□ -0.53
GCN1-208ENST00000551549 SLC34A2O95436 690 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 AKR1B1P15121 316 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 CYP2B6P20813 491 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 C12orf60Q5U649 245 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 UBE2Q1Q7Z7E8 422 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 SIAH1Q8IUQ4 282 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 OTUD7AQ8TE49 926 aaPredicted RBP11.72□□□□□ -0.53
GCN1-208ENST00000551549 U2AF1L4Q8WU68 220 aaKnown RBP11.72□□□□□ -0.53
GCN1-208ENST00000551549 GPATCH3Q96I76 525 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 YTHDC1Q96MU7 727 aaKnown RBP11.72□□□□□ -0.53
GCN1-208ENST00000551549 DEFB118Q96PH6 123 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 STRBPQ96SI9 672 aaKnown RBP11.72□□□□□ -0.53
GCN1-208ENST00000551549 CRBNQ96SW2 442 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 PORCNQ9H237 461 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 RPAP3Q9H6T3 665 aaPredicted RBP11.72□□□□□ -0.53
GCN1-208ENST00000551549 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 MGAMO43451 1857 aa11.72□□□□□ -0.53
GCN1-208ENST00000551549 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
GCN1-208ENST00000551549 SGPL1O95470 568 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 TFRCP02786 760 aaKnown RBP11.71□□□□□ -0.53
GCN1-208ENST00000551549 HMGCRP04035 888 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 MAPK4P31152 587 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 CDK8P49336 464 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 KIAA1755Q5JYT7 1200 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 CTR9Q6PD62 1173 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 KBTBD3Q8NAB2 608 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 GTF3C2Q8WUA4 911 aaPredicted RBP11.71□□□□□ -0.53
GCN1-208ENST00000551549 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
GCN1-208ENST00000551549 PAK6Q9NQU5 681 aaPredicted RBP11.71□□□□□ -0.53
GCN1-208ENST00000551549 H0YGN5 161 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 RNF113AO15541 343 aaKnown RBP11.7□□□□□ -0.54
GCN1-208ENST00000551549 C16orf86Q6ZW13 317 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 GPR142Q7Z601 462 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 PLEKHH3Q7Z736 793 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 CCAR1Q8IX12 1150 aaKnown RBP11.7□□□□□ -0.54
GCN1-208ENST00000551549 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 TRIB2Q92519 343 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 USP6NLQ92738 828 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 NUDT12Q9BQG2 462 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 BTBD7Q9P203 1132 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 RABGAP1Q9Y3P9 1069 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 TRIOBPQ9H2D6 2365 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 LAMA2P24043 3122 aaKnown RBP11.7□□□□□ -0.54
GCN1-208ENST00000551549 NAV1Q8NEY1 1877 aa11.7□□□□□ -0.54
GCN1-208ENST00000551549 SPDYE16A6NNV3 312 aaPredicted RBP11.69□□□□□ -0.54
GCN1-208ENST00000551549 GSG1L2A8MUP6 293 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 M0R2C6 588 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 FARP2O94887 1054 aaPredicted RBP11.69□□□□□ -0.54
GCN1-208ENST00000551549 MORN1Q5T089 497 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 AMOTL1Q8IY63 956 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 SPICE1Q8N0Z3 855 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 SOCS4Q8WXH5 440 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 APPBP2Q92624 585 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 DPF3Q92784 378 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
GCN1-208ENST00000551549 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.69□□□□□ -0.54
GCN1-208ENST00000551549 GPAA1O43292 621 aa11.68□□□□□ -0.54
GCN1-208ENST00000551549 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
GCN1-208ENST00000551549 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
GCN1-208ENST00000551549 ATP2B2Q01814 1243 aa11.68□□□□□ -0.54
GCN1-208ENST00000551549 ICA1Q05084 483 aa11.68□□□□□ -0.54
GCN1-208ENST00000551549 COG2Q14746 738 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms