RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
NUP188-211ENST00000550219 TATDN1Q6P1N9 297 aa16.2■□□□□ 0.18
NUP188-211ENST00000550219 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
NUP188-211ENST00000550219 GPRC5AQ8NFJ5 357 aa16.2■□□□□ 0.18
NUP188-211ENST00000550219 SDR42E1Q8WUS8 393 aa16.2■□□□□ 0.18
NUP188-211ENST00000550219 PAK6Q9NQU5 681 aaPredicted RBP16.2■□□□□ 0.18
NUP188-211ENST00000550219 PLXNB2O15031 1838 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 MPHOSPH10O00566 681 aaKnown RBP16.19■□□□□ 0.18
NUP188-211ENST00000550219 SHMT1P34896 483 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 ERVK-9P63128 1117 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 ERVK-24P63145 666 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 EVX2Q03828 476 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 TRIB2Q92519 343 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 BOLA2Q9H3K6 86 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 CABP5Q9NP86 173 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 MCM9Q9NXL9 1143 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 GJD2Q9UKL4 321 aa16.19■□□□□ 0.18
NUP188-211ENST00000550219 WDR78Q5VTH9 848 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 TMED8Q6PL24 325 aaPredicted RBP16.18■□□□□ 0.18
NUP188-211ENST00000550219 ACER1Q8TDN7 264 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.18■□□□□ 0.18
NUP188-211ENST00000550219 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
NUP188-211ENST00000550219 SOCS4Q8WXH5 440 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 NUDT12Q9BQG2 462 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 PORCNQ9H237 461 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 ARMT1Q9H993 441 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 PAG1Q9NWQ8 432 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 RBPJLQ9UBG7 517 aa16.18■□□□□ 0.18
NUP188-211ENST00000550219 CYP2D6P10635 497 aa16.17■□□□□ 0.18
NUP188-211ENST00000550219 VCAM1P19320 739 aa16.17■□□□□ 0.18
NUP188-211ENST00000550219 MAPK4P31152 587 aa16.17■□□□□ 0.18
NUP188-211ENST00000550219 FXR1P51114 621 aaKnown RBP eCLIP16.17■□□□□ 0.18
NUP188-211ENST00000550219 USP14P54578 494 aa16.17■□□□□ 0.18
NUP188-211ENST00000550219 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
NUP188-211ENST00000550219 DIS3LQ8TF46 1054 aaKnown RBP16.17■□□□□ 0.18
NUP188-211ENST00000550219 C12orf42Q96LP6 360 aa16.17■□□□□ 0.18
NUP188-211ENST00000550219 HMX1Q9NP08 348 aaPredicted RBP16.17■□□□□ 0.18
NUP188-211ENST00000550219 DOCK3Q8IZD9 2030 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 TCRBV5S4A2TA0A5A2 114 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L15C9J2P7 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L13C9JLJ4 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L11C9JVI0 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L18D6R9N7 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L22D6RA61 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L17D6RBQ6 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L19D6RCP7 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L20D6RJB6 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 MBD4O95243 580 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
NUP188-211ENST00000550219 ZKSCAN1P17029 563 aaPredicted RBP16.16■□□□□ 0.18
NUP188-211ENST00000550219 USP17L24Q0WX57 530 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 SEPT2Q15019 361 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 Q3C1V9 767 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 GPR142Q7Z601 462 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 SLC44A5Q8NCS7 719 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 PAWRQ96IZ0 340 aaKnown RBP16.16■□□□□ 0.18
NUP188-211ENST00000550219 KIAA1683Q9H0B3 1180 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 NR2E3Q9Y5X4 410 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
NUP188-211ENST00000550219 EVI5O60447 810 aa16.15■□□□□ 0.18
NUP188-211ENST00000550219 NUCB1Q02818 461 aa16.15■□□□□ 0.18
NUP188-211ENST00000550219 PLEKHH3Q7Z736 793 aa16.15■□□□□ 0.18
NUP188-211ENST00000550219 LRRCC1Q9C099 1032 aa16.15■□□□□ 0.18
NUP188-211ENST00000550219 RPAP3Q9H6T3 665 aaPredicted RBP16.15■□□□□ 0.18
NUP188-211ENST00000550219 DCP1AQ9NPI6 582 aaPredicted RBP16.15■□□□□ 0.18
NUP188-211ENST00000550219 PRKAB2O43741 272 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 SMARCA5O60264 1052 aaPredicted RBP16.14■□□□□ 0.17
NUP188-211ENST00000550219 CNMDO75829 334 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 CHGBP05060 677 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 GUCY1A2P33402 732 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 ADD2P35612 726 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 RGS2P41220 211 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 GABPAQ06546 454 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 CCL14Q16627 93 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 ANKRD45Q5TZF3 282 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 POTEEQ6S8J3 1075 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 NECAB2Q7Z6G3 386 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 CLEC10AQ8IUN9 316 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 DYNLL2Q96FJ2 89 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 APBA2Q99767 749 aa16.14■□□□□ 0.17
NUP188-211ENST00000550219 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.179e-8■■■■■ 26.8
NUP188-211ENST00000550219 RBM27Q9P2N5 1060 aaKnown RBP16.14■□□□□ 0.17
NUP188-211ENST00000550219 ATP5JP18859 108 aa16.13■□□□□ 0.17
NUP188-211ENST00000550219 CCNA1P78396 465 aa16.13■□□□□ 0.17
NUP188-211ENST00000550219 CATSPERGQ6ZRH7 1159 aa16.13■□□□□ 0.17
NUP188-211ENST00000550219 HAUS7Q99871 368 aa16.13■□□□□ 0.17
NUP188-211ENST00000550219 TANGO6Q9C0B7 1094 aa16.13■□□□□ 0.17
NUP188-211ENST00000550219 RABGAP1Q9Y3P9 1069 aa16.13■□□□□ 0.17
NUP188-211ENST00000550219 MYH8P13535 1937 aa16.12■□□□□ 0.17
NUP188-211ENST00000550219 CYP2D7A0A087X1C5 515 aa16.12■□□□□ 0.17
NUP188-211ENST00000550219 SPDYE16A6NNV3 312 aaPredicted RBP16.12■□□□□ 0.17
NUP188-211ENST00000550219 XRCC5P13010 732 aaKnown RBP16.12■□□□□ 0.17
NUP188-211ENST00000550219 MORN1Q5T089 497 aa16.12■□□□□ 0.17
NUP188-211ENST00000550219 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
NUP188-211ENST00000550219 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
NUP188-211ENST00000550219 C7orf61Q8IZ16 206 aa16.12■□□□□ 0.17
NUP188-211ENST00000550219 BTBD7Q9P203 1132 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms