RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 TSPY8P0CW00 308 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 CHRNA5P30532 468 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 CDK8P49336 464 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 USP17L1Q7RTZ2 530 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 FAM43AQ8N2R8 423 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 TTF2Q9UNY4 1162 aaKnown RBP24.17■■□□□ 1.46
RITA1-201ENST00000548278 F8W031 263 aaPredicted RBP24.17■■□□□ 1.46
RITA1-201ENST00000548278 KINO60870 393 aaKnown RBP24.17■■□□□ 1.46
RITA1-201ENST00000548278 PPP6R2O75170 966 aa24.17■■□□□ 1.46
RITA1-201ENST00000548278 WDHD1O75717 1129 aaPredicted RBP24.17■■□□□ 1.46
RITA1-201ENST00000548278 SNED1Q8TER0 1413 aa24.16■■□□□ 1.46
RITA1-201ENST00000548278 A0A1B0GVL5 298 aa24.16■■□□□ 1.46
RITA1-201ENST00000548278 hCG_1642624A0A1W2PR95 340 aa24.16■■□□□ 1.46
RITA1-201ENST00000548278 NDUFA8P51970 172 aa24.16■■□□□ 1.46
RITA1-201ENST00000548278 VPS54Q9P1Q0 977 aa24.16■■□□□ 1.46
RITA1-201ENST00000548278 G3V3G9 751 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 XBP1P17861 261 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 MARCKSP29966 332 aaPredicted RBP24.15■■□□□ 1.46
RITA1-201ENST00000548278 TOB1P50616 345 aaPredicted RBP24.15■■□□□ 1.46
RITA1-201ENST00000548278 NR5A1Q13285 461 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 DCAF8Q5TAQ9 597 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 PODNQ7Z5L7 613 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 PNMA1Q8ND90 353 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 OXER1Q8TDS5 423 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 PHF20Q9BVI0 1012 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 CMA1P23946 247 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 CNKSR1Q969H4 720 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 DBNDD1Q9H9R9 158 aa24.15■■□□□ 1.46
RITA1-201ENST00000548278 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.15■■□□□ 1.46
RITA1-201ENST00000548278 KIF5BP33176 963 aa24.14■■□□□ 1.46
RITA1-201ENST00000548278 SASS6Q6UVJ0 657 aa24.14■■□□□ 1.46
RITA1-201ENST00000548278 JMYQ8N9B5 988 aa24.14■■□□□ 1.46
RITA1-201ENST00000548278 FAM200AQ8TCP9 573 aa24.14■■□□□ 1.46
RITA1-201ENST00000548278 C7orf43Q8WVR3 580 aa24.14■■□□□ 1.46
RITA1-201ENST00000548278 BAZ2BQ9UIF8 2168 aaKnown RBP24.14■■□□□ 1.46
RITA1-201ENST00000548278 RILPL1Q5EBL4 403 aa24.13■■□□□ 1.45
RITA1-201ENST00000548278 HHIPL2Q6UWX4 724 aa24.13■■□□□ 1.45
RITA1-201ENST00000548278 KCNQ5Q9NR82 932 aa24.13■■□□□ 1.45
RITA1-201ENST00000548278 SCNN1DP51172 638 aa24.12■■□□□ 1.45
RITA1-201ENST00000548278 GRM4Q14833 912 aa24.12■■□□□ 1.45
RITA1-201ENST00000548278 ANO6Q4KMQ2 910 aa24.12■■□□□ 1.45
RITA1-201ENST00000548278 NEDD1Q8NHV4 660 aa24.12■■□□□ 1.45
RITA1-201ENST00000548278 RTN4Q9NQC3 1192 aaKnown RBP24.12■■□□□ 1.45
RITA1-201ENST00000548278 ADAMTSL1Q8N6G6 1762 aa24.12■■□□□ 1.45
RITA1-201ENST00000548278 USP25Q9UHP3 1055 aa24.12■■□□□ 1.45
RITA1-201ENST00000548278 TMEM47Q9BQJ4 181 aa24.11■■□□□ 1.45
RITA1-201ENST00000548278 DDX4Q9NQI0 724 aaKnown RBP24.11■■□□□ 1.45
RITA1-201ENST00000548278 RRAGDQ9NQL2 400 aaPredicted RBP24.11■■□□□ 1.45
RITA1-201ENST00000548278 ZNF219Q9P2Y4 722 aaPredicted RBP24.11■■□□□ 1.45
RITA1-201ENST00000548278 SCN9AQ15858 1988 aa24.11■■□□□ 1.45
RITA1-201ENST00000548278 PFKFB1P16118 471 aa24.11■■□□□ 1.45
RITA1-201ENST00000548278 KRT2P35908 639 aa24.11■■□□□ 1.45
RITA1-201ENST00000548278 PICALMQ13492 652 aa24.11■■□□□ 1.45
RITA1-201ENST00000548278 TEKT1Q969V4 418 aa24.11■■□□□ 1.45
RITA1-201ENST00000548278 USP40Q9NVE5 1235 aa24.11■■□□□ 1.45
RITA1-201ENST00000548278 ZNF646O15015 1829 aaPredicted RBP24.1■■□□□ 1.45
RITA1-201ENST00000548278 SCG2P13521 617 aa24.1■■□□□ 1.45
RITA1-201ENST00000548278 NPY5RQ15761 445 aa24.1■■□□□ 1.45
RITA1-201ENST00000548278 PFKFB3Q16875 520 aaPredicted RBP24.1■■□□□ 1.45
RITA1-201ENST00000548278 HS1BP3Q53T59 392 aa24.1■■□□□ 1.45
RITA1-201ENST00000548278 APOBEC3HQ6NTF7 200 aaKnown RBP24.1■■□□□ 1.45
RITA1-201ENST00000548278 SHC4Q6S5L8 630 aa24.1■■□□□ 1.45
RITA1-201ENST00000548278 STAG2Q8N3U4 1231 aa24.1■■□□□ 1.45
RITA1-201ENST00000548278 PDGFDQ9GZP0 370 aaPredicted RBP24.1■■□□□ 1.45
RITA1-201ENST00000548278 MAD2L2Q9UI95 211 aa24.1■■□□□ 1.45
RITA1-201ENST00000548278 STX8Q9UNK0 236 aa24.1■■□□□ 1.45
RITA1-201ENST00000548278 FAM237AA0A1B0GTK4 181 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 FKBP1AP62942 108 aaKnown RBP24.09■■□□□ 1.45
RITA1-201ENST00000548278 GABPAQ06546 454 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 STRIP1Q5VSL9 837 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 CABP5Q9NP86 173 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 HPSEQ9Y251 543 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 ECE2O60344 883 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 CUTAO60888 179 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 ZNF202O95125 648 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 CDC42EP5Q6NZY7 148 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 CBX8Q9HC52 389 aa24.09■■□□□ 1.45
RITA1-201ENST00000548278 ESPNB1AK53 854 aa24.08■■□□□ 1.45
RITA1-201ENST00000548278 GNAQP50148 359 aa24.08■■□□□ 1.45
RITA1-201ENST00000548278 DACT2Q5SW24 774 aa24.08■■□□□ 1.45
RITA1-201ENST00000548278 RESP18Q5W5W9 173 aa24.08■■□□□ 1.45
RITA1-201ENST00000548278 TNFRSF25Q93038 417 aa24.08■■□□□ 1.45
RITA1-201ENST00000548278 MRIQ9BWK5 157 aa24.08■■□□□ 1.45
RITA1-201ENST00000548278 PCDHB6Q9Y5E3 794 aa24.08■■□□□ 1.45
RITA1-201ENST00000548278 VEGFAP15692 232 aaPredicted RBP24.07■■□□□ 1.44
RITA1-201ENST00000548278 CRKP46108 304 aa24.07■■□□□ 1.44
RITA1-201ENST00000548278 NOVP48745 357 aa24.07■■□□□ 1.44
RITA1-201ENST00000548278 EARS2Q5JPH6 523 aaKnown RBP24.07■■□□□ 1.44
RITA1-201ENST00000548278 CLIC6Q96NY7 704 aa24.07■■□□□ 1.44
RITA1-201ENST00000548278 SDF4Q9BRK5 362 aa24.07■■□□□ 1.44
RITA1-201ENST00000548278 CAVIN2O95810 425 aa24.07■■□□□ 1.44
RITA1-201ENST00000548278 PRKCSHP14314 528 aaPredicted RBP24.07■■□□□ 1.44
RITA1-201ENST00000548278 KRI1Q8N9T8 703 aaKnown RBP24.07■■□□□ 1.44
RITA1-201ENST00000548278 DNAJC25Q9H1X3 360 aa24.07■■□□□ 1.44
RITA1-201ENST00000548278 BRMS1Q9HCU9 246 aa24.07■■□□□ 1.44
RITA1-201ENST00000548278 PALM3A6NDB9 673 aaPredicted RBP24.06■■□□□ 1.44
RITA1-201ENST00000548278 FAM205CA6NFA0 338 aa24.06■■□□□ 1.44
RITA1-201ENST00000548278 ADCY5O95622 1261 aa24.06■■□□□ 1.44
RITA1-201ENST00000548278 SLC35G1Q2M3R5 365 aa24.06■■□□□ 1.44
RITA1-201ENST00000548278 CC2D2BQ6DHV5 1058 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms