RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 USP17L18D6R9N7 530 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 USP17L22D6RA61 530 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 USP17L17D6RBQ6 530 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 USP17L19D6RCP7 530 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 USP17L20D6RJB6 530 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 ERC2O15083 957 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 ZFYP08048 801 aaPredicted RBP22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 CYP2D6P10635 497 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 USP17L24Q0WX57 530 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 SEPT2Q15019 361 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 GPRC5AQ8NFJ5 357 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 ACER1Q8TDN7 264 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 DOCK3Q8IZD9 2030 aa22.43■■□□□ 1.18
CHMP1A-203ENST00000547614 AAMPQ13685 434 aa22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 LRRFIP1Q32MZ4 808 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 PRPF38BQ5VTL8 546 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 TSHZ3Q63HK5 1081 aa22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 TMEM179Q6ZVK1 233 aa22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 NKX2-3Q8TAU0 364 aa22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 APPBP2Q92624 585 aa22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 CCDC17Q96LX7 622 aa22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 STRBPQ96SI9 672 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 RBPJLQ9UBG7 517 aa22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 MKI67P46013 3256 aaKnown RBP22.42■■□□□ 1.18
CHMP1A-203ENST00000547614 MPHOSPH10O00566 681 aaKnown RBP22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 RNF113AO15541 343 aaKnown RBP22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 GJB1P08034 283 aa22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 CCL5P13501 91 aa22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 ZYXQ15942 572 aaKnown RBP22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 SLC44A5Q8NCS7 719 aa22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 DYNLL2Q96FJ2 89 aa22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 TXNRD2Q9NNW7 524 aa22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 GJD2Q9UKL4 321 aa22.41■■□□□ 1.18
CHMP1A-203ENST00000547614 BAZ2AQ9UIF9 1905 aaKnown RBP22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 GLRX3O76003 335 aaKnown RBP22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 VCAM1P19320 739 aa22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 GIMAP6Q6P9H5 292 aa22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 CTR9Q6PD62 1173 aa22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 CATSPERGQ6ZRH7 1159 aa22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 C16orf86Q6ZW13 317 aa22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 PI4K2BQ8TCG2 481 aa22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 RNF208Q9H0X6 261 aa22.4■■□□□ 1.18
CHMP1A-203ENST00000547614 ELNP15502 786 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 GJA8P48165 433 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 CDK8P49336 464 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 ERVK-9P63128 1117 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 ERVK-24P63145 666 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 HDAC1Q13547 482 aaPredicted RBP22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 OSBP2Q969R2 916 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 GCC1Q96CN9 775 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 ARPP21Q9UBL0 812 aaPredicted RBP22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 ZBTB47Q9UFB7 747 aaPredicted RBP22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 RABGAP1Q9Y3P9 1069 aa22.39■■□□□ 1.17
CHMP1A-203ENST00000547614 CYP2D7A0A087X1C5 515 aa22.38■■□□□ 1.17
CHMP1A-203ENST00000547614 A0A1W2PRG0 241 aa22.38■■□□□ 1.17
CHMP1A-203ENST00000547614 CAPN2P17655 700 aa22.38■■□□□ 1.17
CHMP1A-203ENST00000547614 MX1P20591 662 aa22.38■■□□□ 1.17
CHMP1A-203ENST00000547614 MAPK4P31152 587 aa22.38■■□□□ 1.17
CHMP1A-203ENST00000547614 SBK1Q52WX2 424 aa22.38■■□□□ 1.17
CHMP1A-203ENST00000547614 LBX2Q6XYB7 198 aa22.38■■□□□ 1.17
CHMP1A-203ENST00000547614 GSG1L2A8MUP6 293 aa22.37■■□□□ 1.17
CHMP1A-203ENST00000547614 INHAP05111 366 aa22.37■■□□□ 1.17
CHMP1A-203ENST00000547614 GNAT2P19087 354 aa22.37■■□□□ 1.17
CHMP1A-203ENST00000547614 Q3C1V9 767 aa22.37■■□□□ 1.17
CHMP1A-203ENST00000547614 POTEEQ6S8J3 1075 aa22.37■■□□□ 1.17
CHMP1A-203ENST00000547614 OTUD7AQ8TE49 926 aaPredicted RBP22.37■■□□□ 1.17
CHMP1A-203ENST00000547614 PEX10O60683 326 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 AKR1B1P15121 316 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 ANKRD45Q5TZF3 282 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 CCAR1Q8IX12 1150 aaKnown RBP22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 SHISA4Q96DD7 197 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 PAGR1Q9BTK6 254 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 UNC93B1Q9H1C4 597 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 RPAP3Q9H6T3 665 aaPredicted RBP22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 SH2D4AQ9H788 454 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 ARHGEF10LQ9HCE6 1279 aa22.36■■□□□ 1.17
CHMP1A-203ENST00000547614 SALL3Q9BXA9 1300 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 SMIM22K7EJ46 135 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 GPAA1O43292 621 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 XRCC5P13010 732 aaKnown RBP22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 CCNA1P78396 465 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 SIAH1Q8IUQ4 282 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 SOCS4Q8WXH5 440 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 LPAR1Q92633 364 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 NUDT12Q9BQG2 462 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 HOXC10Q9NYD6 342 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 TMX2Q9Y320 296 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 MYH8P13535 1937 aa22.35■■□□□ 1.17
CHMP1A-203ENST00000547614 SGPL1O95470 568 aa22.34■■□□□ 1.17
CHMP1A-203ENST00000547614 HMGCRP04035 888 aa22.34■■□□□ 1.17
CHMP1A-203ENST00000547614 ICA1Q05084 483 aa22.34■■□□□ 1.17
CHMP1A-203ENST00000547614 COG2Q14746 738 aa22.34■■□□□ 1.17
CHMP1A-203ENST00000547614 U2AF1L4Q8WU68 220 aaKnown RBP22.34■■□□□ 1.17
CHMP1A-203ENST00000547614 PORCNQ9H237 461 aa22.34■■□□□ 1.17
CHMP1A-203ENST00000547614 KANSL2Q9H9L4 492 aa22.34■■□□□ 1.17
CHMP1A-203ENST00000547614 CNMDO75829 334 aa22.33■■□□□ 1.17
CHMP1A-203ENST00000547614 PLEKHH3Q7Z736 793 aa22.33■■□□□ 1.17
CHMP1A-203ENST00000547614 PAK6Q9NQU5 681 aaPredicted RBP22.33■■□□□ 1.17
CHMP1A-203ENST00000547614 STAP2Q9UGK3 403 aa22.33■■□□□ 1.17
CHMP1A-203ENST00000547614 SPDYE16A6NNV3 312 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms