RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 GUCY1A2P33402 732 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 ERVK-9P63128 1117 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 ERVK-24P63145 666 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 GABPAQ06546 454 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 SEPT2Q15019 361 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 C12orf42Q96LP6 360 aa17.32■□□□□ 0.36
TROAP-203ENST00000546735 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.32■□□□□ 0.36
TROAP-203ENST00000546735 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
TROAP-203ENST00000546735 DCP1AQ9NPI6 582 aaPredicted RBP17.32■□□□□ 0.36
TROAP-203ENST00000546735 DDX60LQ5H9U9 1706 aaKnown RBP17.32■□□□□ 0.36
TROAP-203ENST00000546735 MPHOSPH10O00566 681 aaKnown RBP17.31■□□□□ 0.36
TROAP-203ENST00000546735 MBD4O95243 580 aa17.31■□□□□ 0.36
TROAP-203ENST00000546735 ADD2P35612 726 aa17.31■□□□□ 0.36
TROAP-203ENST00000546735 SLC44A5Q8NCS7 719 aa17.31■□□□□ 0.36
TROAP-203ENST00000546735 TRIB2Q92519 343 aa17.31■□□□□ 0.36
TROAP-203ENST00000546735 HTATIP2Q9BUP3 242 aa17.31■□□□□ 0.36
TROAP-203ENST00000546735 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 CNMDO75829 334 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 VCAM1P19320 739 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 USP17L24Q0WX57 530 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 PDE3AQ14432 1141 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 CATSPERGQ6ZRH7 1159 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 DYNLL2Q96FJ2 89 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 HAUS7Q99871 368 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 NUDT12Q9BQG2 462 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 LRRCC1Q9C099 1032 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 KIAA1683Q9H0B3 1180 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 CRISPLD2Q9H0B8 497 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
TROAP-203ENST00000546735 A0A1W2PRG0 241 aa17.29■□□□□ 0.36
TROAP-203ENST00000546735 MAPK4P31152 587 aa17.29■□□□□ 0.36
TROAP-203ENST00000546735 USP14P54578 494 aa17.29■□□□□ 0.36
TROAP-203ENST00000546735 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
TROAP-203ENST00000546735 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
TROAP-203ENST00000546735 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
TROAP-203ENST00000546735 DIS3LQ8TF46 1054 aaKnown RBP17.29■□□□□ 0.36
TROAP-203ENST00000546735 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
TROAP-203ENST00000546735 PLXNB2O15031 1838 aa17.28■□□□□ 0.36
TROAP-203ENST00000546735 RPTORQ8N122 1335 aa17.28■□□□□ 0.36
TROAP-203ENST00000546735 CYP2D7A0A087X1C5 515 aa17.28■□□□□ 0.36
TROAP-203ENST00000546735 CCL14Q16627 93 aa17.28■□□□□ 0.36
TROAP-203ENST00000546735 PLEKHH3Q7Z736 793 aa17.28■□□□□ 0.36
TROAP-203ENST00000546735 CLEC10AQ8IUN9 316 aa17.28■□□□□ 0.36
TROAP-203ENST00000546735 GTF3C2Q8WUA4 911 aaPredicted RBP17.28■□□□□ 0.36
TROAP-203ENST00000546735 PAWRQ96IZ0 340 aaKnown RBP17.28■□□□□ 0.36
TROAP-203ENST00000546735 RPAP3Q9H6T3 665 aaPredicted RBP17.28■□□□□ 0.36
TROAP-203ENST00000546735 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
TROAP-203ENST00000546735 USP6NLQ92738 828 aa17.27■□□□□ 0.36
TROAP-203ENST00000546735 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.27■□□□□ 0.361e-6■■■□□ 15.7
TROAP-203ENST00000546735 CWC22Q9HCG8 908 aaKnown RBP17.27■□□□□ 0.36
TROAP-203ENST00000546735 BTBD7Q9P203 1132 aa17.27■□□□□ 0.36
TROAP-203ENST00000546735 RABGAP1Q9Y3P9 1069 aa17.27■□□□□ 0.36
TROAP-203ENST00000546735 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
TROAP-203ENST00000546735 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
TROAP-203ENST00000546735 AKR1B1P15121 316 aa17.26■□□□□ 0.35
TROAP-203ENST00000546735 FXR1P51114 621 aaKnown RBP eCLIP17.26■□□□□ 0.35
TROAP-203ENST00000546735 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
TROAP-203ENST00000546735 KIAA1755Q5JYT7 1200 aa17.26■□□□□ 0.35
TROAP-203ENST00000546735 MORN1Q5T089 497 aa17.26■□□□□ 0.35
TROAP-203ENST00000546735 WDR78Q5VTH9 848 aa17.26■□□□□ 0.35
TROAP-203ENST00000546735 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
TROAP-203ENST00000546735 PUS7LQ9H0K6 701 aaKnown RBP17.26■□□□□ 0.35
TROAP-203ENST00000546735 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
TROAP-203ENST00000546735 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
TROAP-203ENST00000546735 USP17L21D6R901 530 aa17.25■□□□□ 0.35
TROAP-203ENST00000546735 XRCC5P13010 732 aaKnown RBP17.25■□□□□ 0.35
TROAP-203ENST00000546735 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
TROAP-203ENST00000546735 RGS2P41220 211 aa17.25■□□□□ 0.35
TROAP-203ENST00000546735 MAP3K21Q5TCX8 1036 aa17.25■□□□□ 0.35
TROAP-203ENST00000546735 ATP8A2Q9NTI2 1148 aa17.25■□□□□ 0.35
TROAP-203ENST00000546735 SWAP70Q9UH65 585 aa17.25■□□□□ 0.35
TROAP-203ENST00000546735 EVI5O60447 810 aa17.24■□□□□ 0.35
TROAP-203ENST00000546735 CACNB2Q08289 660 aaPredicted RBP17.24■□□□□ 0.35
TROAP-203ENST00000546735 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
TROAP-203ENST00000546735 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
TROAP-203ENST00000546735 NECAB2Q7Z6G3 386 aa17.24■□□□□ 0.35
TROAP-203ENST00000546735 SIAH1Q8IUQ4 282 aa17.24■□□□□ 0.35
TROAP-203ENST00000546735 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
TROAP-203ENST00000546735 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
TROAP-203ENST00000546735 NR2E3Q9Y5X4 410 aa17.24■□□□□ 0.35
TROAP-203ENST00000546735 CCND3P30281 292 aaPredicted RBP17.23■□□□□ 0.35
TROAP-203ENST00000546735 CDK8P49336 464 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
TROAP-203ENST00000546735 CCNA1P78396 465 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 MAP2K5Q13163 448 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 ZSCAN25Q6NSZ9 544 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 LBX2Q6XYB7 198 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 APBA2Q99767 749 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 FLRT1Q9NZU1 646 aa17.23■□□□□ 0.35
TROAP-203ENST00000546735 PCDH10Q9P2E7 1040 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms