RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 PDGFDQ9GZP0 370 aaPredicted RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 USP17L3A6NCW0 530 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 USP17L4A6NCW7 530 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 WDHD1O75717 1129 aaPredicted RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 TSPY3P0CV98 308 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 TSPY8P0CW00 308 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 FAM160A1Q05DH4 1040 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 GNL2Q13823 731 aaKnown RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 GRM4Q14833 912 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 CAMK4Q16566 473 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 AXDND1Q5T1B0 1012 aaPredicted RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 STRIP1Q5VSL9 837 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 USP17L1Q7RTZ2 530 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 DEFB132Q7Z7B7 95 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 NOSTRINQ8IVI9 506 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 MRPS27Q92552 414 aaKnown RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 PDLIM2Q96JY6 352 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 PHF20Q9BVI0 1012 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 MRIQ9BWK5 157 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 DDX4Q9NQI0 724 aaKnown RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 KCNQ5Q9NR82 932 aa17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 V9GY48 417 aaPredicted RBP17.62■□□□□ 0.41
CALCOCO1-203ENST00000546443 ECE2O60344 883 aa17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 PPP6R2O75170 966 aa17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 CCDC192P0DO97 292 aa17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 NOVP48745 357 aa17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 GABPAQ06546 454 aa17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 DACT2Q5SW24 774 aa17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 FMR1NBQ8N0W7 255 aaPredicted RBP17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 PNMA1Q8ND90 353 aa17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 ANP32BQ92688 251 aaKnown RBP17.61■□□□□ 0.41
CALCOCO1-203ENST00000546443 KIF5BP33176 963 aa17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 TOB1P50616 345 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 SCNN1DP51172 638 aa17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 APOBEC3HQ6NTF7 200 aaKnown RBP17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 CDC42EP5Q6NZY7 148 aa17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 TEKT1Q969V4 418 aa17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 USP40Q9NVE5 1235 aa17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 TAOK2Q9UL54 1235 aa17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 PLIN4Q96Q06 1357 aa17.6■□□□□ 0.41
CALCOCO1-203ENST00000546443 SIPA1L1O43166 1804 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 CTAGE5O15320 804 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 XBP1P17861 261 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 CRKP46108 304 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 TYRO3Q06418 890 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 KIAA2012Q0VF49 1180 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 CKAP2LQ8IYA6 745 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 SUPT20HQ8NEM7 779 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 OXER1Q8TDS5 423 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 ZDHHC15Q96MV8 337 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 TMEM47Q9BQJ4 181 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 VPS54Q9P1Q0 977 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 GREB1LQ9C091 1923 aaPredicted RBP17.59■□□□□ 0.41
CALCOCO1-203ENST00000546443 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.41
CALCOCO1-203ENST00000546443 CMA1P23946 247 aa17.58■□□□□ 0.41
CALCOCO1-203ENST00000546443 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.41
CALCOCO1-203ENST00000546443 NR5A1Q13285 461 aa17.58■□□□□ 0.41
CALCOCO1-203ENST00000546443 NPY5RQ15761 445 aa17.58■□□□□ 0.41
CALCOCO1-203ENST00000546443 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.41
CALCOCO1-203ENST00000546443 FAM237AA0A1B0GTK4 181 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 A0A1B0GVL5 298 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 GNAQP50148 359 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 PICALMQ13492 652 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 PFKFB3Q16875 520 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 RILPL1Q5EBL4 403 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 OSBPL5Q9H0X9 879 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 MAD2L2Q9UI95 211 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 MYO3BQ8WXR4 1341 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 PALM3A6NDB9 673 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 SCG2P13521 617 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 MARCKSP29966 332 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 KRT2P35908 639 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 NDUFA8P51970 172 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 AOC3Q16853 763 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 SLC35G1Q2M3R5 365 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 STAG2Q8N3U4 1231 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 JMYQ8N9B5 988 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 TNFRSF25Q93038 417 aa17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 MORC2Q9Y6X9 1032 aaPredicted RBP17.57■□□□□ 0.4
CALCOCO1-203ENST00000546443 KINO60870 393 aaKnown RBP17.56■□□□□ 0.4
CALCOCO1-203ENST00000546443 CUTAO60888 179 aa17.56■□□□□ 0.4
CALCOCO1-203ENST00000546443 KCNA3P22001 575 aa17.56■□□□□ 0.4
CALCOCO1-203ENST00000546443 GRIPAP1Q4V328 841 aa17.56■□□□□ 0.4
CALCOCO1-203ENST00000546443 HPSEQ9Y251 543 aa17.56■□□□□ 0.4
CALCOCO1-203ENST00000546443 IGKV6D-41A0A0C4DH26 115 aa17.55■□□□□ 0.4
CALCOCO1-203ENST00000546443 C21orf2O43822 256 aa17.55■□□□□ 0.4
CALCOCO1-203ENST00000546443 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
CALCOCO1-203ENST00000546443 SWAP70Q9UH65 585 aa17.55■□□□□ 0.4
CALCOCO1-203ENST00000546443 TOP1P11387 765 aaKnown RBP17.54■□□□□ 0.4
CALCOCO1-203ENST00000546443 PFKFB1P16118 471 aa17.54■□□□□ 0.4
CALCOCO1-203ENST00000546443 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
CALCOCO1-203ENST00000546443 SASS6Q6UVJ0 657 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms