RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 LOC285556D6RIA3 1793 aa12.97□□□□□ -0.33
PTP4A2-216ENST00000534796 H0YGN5 161 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 GDF11O95390 407 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 HMGCRP04035 888 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 UBE2Q1Q7Z7E8 422 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 GPRC5AQ8NFJ5 357 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 RHPN1Q8TCX5 695 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 NR2E3Q9Y5X4 410 aa12.96□□□□□ -0.33
PTP4A2-216ENST00000534796 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 TFRCP02786 760 aaKnown RBP12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 USP14P54578 494 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 HERVK_113P62684 666 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 TATDN1Q6P1N9 297 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 CCAR1Q8IX12 1150 aaKnown RBP12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 SOCS4Q8WXH5 440 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 DEFB118Q96PH6 123 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 FEZ1Q99689 392 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 ANTXR1Q9H6X2 564 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 IL1RAPL2Q9NP60 686 aa12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 PAK6Q9NQU5 681 aaPredicted RBP12.95□□□□□ -0.34
PTP4A2-216ENST00000534796 CEP290O15078 2479 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 MGAMO43451 1857 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 MAGEB6P1A0A0J9YX57 407 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 GH2P01242 217 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 IFIT2P09913 472 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 MAPK4P31152 587 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 JAG1P78504 1218 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 CERKLQ49MI3 558 aaPredicted RBP12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 SLC9C2Q5TAH2 1124 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 MAMSTRQ6ZN01 415 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 TRMT44Q8IYL2 757 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 C12orf42Q96LP6 360 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 P2RX7Q99572 595 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 NUDT12Q9BQG2 462 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.94□□□□□ -0.344e-8■■■■■ 32.9
PTP4A2-216ENST00000534796 CABP5Q9NP86 173 aa12.94□□□□□ -0.34
PTP4A2-216ENST00000534796 ATAD5Q96QE3 1844 aa12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 XRCC5P13010 732 aaKnown RBP12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 ABCB5Q2M3G0 1257 aa12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 RIOK1Q9BRS2 568 aaKnown RBP12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 GJD2Q9UKL4 321 aa12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 NDUFB9Q9Y6M9 179 aa12.93□□□□□ -0.34
PTP4A2-216ENST00000534796 RPTORQ8N122 1335 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 POLR3DP05423 398 aaPredicted RBP12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 PDE6AP16499 860 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 CCNA1P78396 465 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 RAB3GAP1Q15042 981 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 KIAA1683Q9H0B3 1180 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 EMILIN3Q9NT22 766 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 RBPJLQ9UBG7 517 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 SIPA1L1O43166 1804 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 FOCADQ5VW36 1801 aa12.92□□□□□ -0.34
PTP4A2-216ENST00000534796 APBB1O00213 710 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 GOLIM4O00461 696 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 EVI5O60447 810 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 RGS2P41220 211 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 ERVK-9P63128 1117 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 ERVK-24P63145 666 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 SHROOM1Q2M3G4 852 aaPredicted RBP12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 NECAB2Q7Z6G3 386 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 DNAJC2Q99543 621 aaKnown RBP12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 TXNRD2Q9NNW7 524 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 RABGAP1Q9Y3P9 1069 aa12.91□□□□□ -0.34
PTP4A2-216ENST00000534796 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 CYP2B6P20813 491 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 PLCD1P51178 756 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 PLEKHH3Q7Z736 793 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 TRIB2Q92519 343 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 PAGR1Q9BTK6 254 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 OCEL1Q9H607 264 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 MCM9Q9NXL9 1143 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 RCAN3Q9UKA8 241 aa12.9□□□□□ -0.34
PTP4A2-216ENST00000534796 ZKSCAN1P17029 563 aaPredicted RBP12.89□□□□□ -0.35
PTP4A2-216ENST00000534796 ATP5JP18859 108 aa12.89□□□□□ -0.35
PTP4A2-216ENST00000534796 VCAM1P19320 739 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms