RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 FOXD4L6Q3SYB3 417 aaPredicted RBP16.93■□□□□ 0.3
NR1H3-231ENST00000529540 SUPT20HL1Q3ZLR7 823 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 CCDC178Q5BJE1 867 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 PPP4R3BQ5MIZ7 849 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 DCAF15Q66K64 600 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 FOXD4L3Q6VB84 417 aaPredicted RBP16.93■□□□□ 0.3
NR1H3-231ENST00000529540 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 CCDC17Q96LX7 622 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
NR1H3-231ENST00000529540 POTECB2RU33 542 aa16.92■□□□□ 0.3
NR1H3-231ENST00000529540 CDK8P49336 464 aa16.92■□□□□ 0.3
NR1H3-231ENST00000529540 EAPPQ56P03 285 aaPredicted RBP16.92■□□□□ 0.3
NR1H3-231ENST00000529540 STOX1Q6ZVD7 989 aa16.92■□□□□ 0.3
NR1H3-231ENST00000529540 ZFPM1Q8IX07 1006 aa16.92■□□□□ 0.3
NR1H3-231ENST00000529540 CCDC94Q9BW85 323 aaPredicted RBP16.92■□□□□ 0.3
NR1H3-231ENST00000529540 TMEM39BQ9GZU3 492 aa16.92■□□□□ 0.3
NR1H3-231ENST00000529540 RPS6KB1P23443 525 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 RRP12Q5JTH9 1297 aaKnown RBP16.91■□□□□ 0.3
NR1H3-231ENST00000529540 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 MB21D2Q8IYB1 491 aaPredicted RBP16.91■□□□□ 0.3
NR1H3-231ENST00000529540 FBXL16Q8N461 479 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 TMEM87BQ96K49 555 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 ALDH8A1Q9H2A2 487 aaPredicted RBP16.91■□□□□ 0.3
NR1H3-231ENST00000529540 NEDD4P46934 1319 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 ERICH2A1L162 156 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 TSPY2A6NKD2 308 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 B4E1Z4 1266 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 RANBP6O60518 1105 aaKnown RBP16.91■□□□□ 0.3
NR1H3-231ENST00000529540 FGD1P98174 961 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 MAP3K10Q02779 954 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 SLC4A8Q2Y0W8 1093 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 DNTTIP2Q5QJE6 756 aaKnown RBP16.91■□□□□ 0.3
NR1H3-231ENST00000529540 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 PDRG1Q9NUG6 133 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 TAF6LQ9Y6J9 622 aa16.91■□□□□ 0.3
NR1H3-231ENST00000529540 FIBPO43427 364 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 LARGE1O95461 756 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 TSPY3P0CV98 308 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 TSPY8P0CW00 308 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 GJB2P29033 226 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 NF2P35240 595 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 DYNLL2Q96FJ2 89 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 TEPSINQ96N21 525 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
NR1H3-231ENST00000529540 TTC12Q9H892 705 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-231ENST00000529540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
NR1H3-231ENST00000529540 ASTN2O75129 1339 aaPredicted RBP16.9■□□□□ 0.3
NR1H3-231ENST00000529540 TATDN1Q6P1N9 297 aa16.89■□□□□ 0.29
NR1H3-231ENST00000529540 TMTC2Q8N394 836 aa16.89■□□□□ 0.29
NR1H3-231ENST00000529540 GINM1Q9NU53 330 aa16.89■□□□□ 0.29
NR1H3-231ENST00000529540 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
NR1H3-231ENST00000529540 TCHHQ07283 1943 aa16.89■□□□□ 0.29
NR1H3-231ENST00000529540 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 ELP1O95163 1332 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 PRC1O43663 620 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 RASA1P20936 1047 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 EXOSC10Q01780 885 aaKnown RBP16.88■□□□□ 0.29
NR1H3-231ENST00000529540 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 KIAA1524Q8TCG1 905 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 ZNF830Q96NB3 372 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-231ENST00000529540 TCP11L1Q9NUJ3 509 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 ZSWIM5Q9P217 1185 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 PRDM4Q9UKN5 801 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 GOLGA6L6A8MZA4 724 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 PRDM1O75626 825 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 SHMT1P34896 483 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 CERKLQ49MI3 558 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-231ENST00000529540 CCDC83Q8IWF9 413 aa16.88■□□□□ 0.29
NR1H3-231ENST00000529540 CCDC192P0DO97 292 aa16.87■□□□□ 0.29
NR1H3-231ENST00000529540 TFAP4Q01664 338 aa16.87■□□□□ 0.29
NR1H3-231ENST00000529540 DNM1Q05193 864 aaKnown RBP16.87■□□□□ 0.29
NR1H3-231ENST00000529540 ZNF710Q8N1W2 664 aa16.87■□□□□ 0.29
NR1H3-231ENST00000529540 SLC44A5Q8NCS7 719 aa16.87■□□□□ 0.29
NR1H3-231ENST00000529540 NEDD1Q8NHV4 660 aa16.87■□□□□ 0.29
NR1H3-231ENST00000529540 ZNF341Q9BYN7 854 aa16.87■□□□□ 0.29
NR1H3-231ENST00000529540 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
NR1H3-231ENST00000529540 CABP5Q9NP86 173 aa16.87■□□□□ 0.29
NR1H3-231ENST00000529540 ANGEL1Q9UNK9 670 aaKnown RBP16.87■□□□□ 0.29
NR1H3-231ENST00000529540 PPP1R12BO60237 982 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-231ENST00000529540 LIFRP42702 1097 aa16.86■□□□□ 0.29
NR1H3-231ENST00000529540 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
NR1H3-231ENST00000529540 ZSCAN10Q96SZ4 725 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-231ENST00000529540 AGXT2Q9BYV1 514 aa16.86■□□□□ 0.29
NR1H3-231ENST00000529540 DNAJC18Q9H819 358 aa16.86■□□□□ 0.29
NR1H3-231ENST00000529540 KIF3AQ9Y496 699 aa16.86■□□□□ 0.29
NR1H3-231ENST00000529540 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
NR1H3-231ENST00000529540 IFIT3O14879 490 aaKnown RBP16.85■□□□□ 0.29
NR1H3-231ENST00000529540 AP5Z1O43299 807 aa16.85■□□□□ 0.29
NR1H3-231ENST00000529540 EVX2Q03828 476 aa16.85■□□□□ 0.29
NR1H3-231ENST00000529540 NBPF12Q5TAG4 269 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-231ENST00000529540 TMEM179Q6ZVK1 233 aa16.85■□□□□ 0.29
NR1H3-231ENST00000529540 DGKHQ86XP1 1220 aa16.85■□□□□ 0.29
NR1H3-231ENST00000529540 KCNF1Q9H3M0 494 aa16.85■□□□□ 0.29
NR1H3-231ENST00000529540 NMRK2Q9NPI5 230 aa16.85■□□□□ 0.29
NR1H3-231ENST00000529540 INCENPQ9NQS7 918 aa16.85■□□□□ 0.29
NR1H3-231ENST00000529540 TACC3Q9Y6A5 838 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms