RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TRIB2Q92519 343 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 PAWRQ96IZ0 340 aaKnown RBP21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RIOK1Q9BRS2 568 aaKnown RBP21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 KIAA1683Q9H0B3 1180 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 CWC22Q9HCG8 908 aaKnown RBP21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RBPJLQ9UBG7 517 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RABGAP1Q9Y3P9 1069 aa21.22■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 POLR3DP05423 398 aaPredicted RBP21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 ZKSCAN1P17029 563 aaPredicted RBP21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 MAP3K21Q5TCX8 1036 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 PLEKHH3Q7Z736 793 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 PAGR1Q9BTK6 254 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 PRO3102Q9H379 93 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 IL1RAPL2Q9NP60 686 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 NDUFB9Q9Y6M9 179 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 ALPK3Q96L96 1907 aa21.21■□□□□ 0.99
CKLF-CMTM1-202ENST00000527845 IFIT2P09913 472 aaKnown RBP21.2■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 PRKAR2AP13861 404 aaKnown RBP21.2■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 SLC9C2Q5TAH2 1124 aa21.2■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 GPR142Q7Z601 462 aa21.2■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 APBA2Q99767 749 aa21.2■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 NBPF3Q9H094 633 aa21.2■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 RAB11FIP3O75154 756 aa21.19■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 PDE6AP16499 860 aa21.19■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 LBX2Q6XYB7 198 aa21.19■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 USP6NLQ92738 828 aa21.19■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 OGDHLQ9ULD0 1010 aa21.19■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 MYH8P13535 1937 aa21.18■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 SHMT1P34896 483 aa21.18■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 TRIM32Q13049 653 aa21.18■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 ZYXQ15942 572 aaKnown RBP21.18■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 MORN1Q5T089 497 aa21.18■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 CATSPERGQ6ZRH7 1159 aa21.18■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 PORCNQ9H237 461 aa21.18■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 VCAM1P19320 739 aa21.17■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 PLCD1P51178 756 aa21.17■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 GABPAQ06546 454 aa21.17■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 Q3C1V9 767 aa21.17■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 DIS3LQ8TF46 1054 aaKnown RBP21.17■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 DNAJC2Q99543 621 aaKnown RBP21.17■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 C11orf49Q9H6J7 331 aa21.17■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 ZNF532Q9HCE3 1301 aa21.16■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 MAP2K5Q13163 448 aa21.16■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 MCM9Q9NXL9 1143 aa21.16■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 SWAP70Q9UH65 585 aa21.16■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 IVNS1ABPQ9Y6Y0 642 aa21.16■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 GOLIM4O00461 696 aa21.15■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 CACNB2Q08289 660 aaPredicted RBP21.15■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 ZBTB40Q9NUA8 1239 aa21.15■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 MYH7P12883 1935 aa21.14■□□□□ 0.98
CKLF-CMTM1-202ENST00000527845 ZNF236Q9UL36 1845 aa21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 SLC15A5A6NIM6 579 aa21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 PEX10O60683 326 aa21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 CNMDO75829 334 aa21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 AMOTL1Q8IY63 956 aa21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 ACER1Q8TDN7 264 aa21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 EDC3Q96F86 508 aaKnown RBP21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 RPAP3Q9H6T3 665 aaPredicted RBP21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 DCP1AQ9NPI6 582 aaPredicted RBP21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 PAG1Q9NWQ8 432 aa21.14■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 FRMPD3Q5JV73 1810 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 TCRBV5S4A2TA0A5A2 114 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 APBB1O00213 710 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 MFSD14CQ5VZR4 134 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 TMEM179Q6ZVK1 233 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 C7orf61Q8IZ16 206 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 SH2D4AQ9H788 454 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 ATP8A2Q9NTI2 1148 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 COG6Q9Y2V7 657 aa21.13■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 SPDYE16A6NNV3 312 aaPredicted RBP21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 MPHOSPH10O00566 681 aaKnown RBP21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 HOXC6P09630 235 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 ATP5JP18859 108 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 PTPREP23469 700 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 GUCY1A2P33402 732 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 BMP8BP34820 402 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 MNX1P50219 401 aaPredicted RBP21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 SEPT2Q15019 361 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 WDR78Q5VTH9 848 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 POTEEQ6S8J3 1075 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 LCORLQ8N3X6 602 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 HOXC10Q9NYD6 342 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 A0A0G2JMZ2 1700 aa21.12■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 MSCO60682 206 aa21.11■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 GRB14Q14449 540 aa21.11■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 SDR42E1Q8WUS8 393 aa21.11■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 LPAR1Q92633 364 aa21.11■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 ADD2P35612 726 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 COG2Q14746 738 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 CCL14Q16627 93 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 SIRT2Q8IXJ6 389 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 MB21D1Q8N884 522 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 CCDC17Q96LX7 622 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 GDF15Q99988 308 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 ARHGEF10LQ9HCE6 1279 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 STAP2Q9UGK3 403 aa21.1■□□□□ 0.97
CKLF-CMTM1-202ENST00000527845 RANBP2P49792 3224 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms