RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 MAPK4P31152 587 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 ERVK-9P63128 1117 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 ERVK-24P63145 666 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 ZYXQ15942 572 aaKnown RBP14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 Q3C1V9 767 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 CCAR1Q8IX12 1150 aaKnown RBP14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 EDC3Q96F86 508 aaKnown RBP14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 NUDT12Q9BQG2 462 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 CRISPLD2Q9H0B8 497 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 BOLA2Q9H3K6 86 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 PAG1Q9NWQ8 432 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 DOCK3Q8IZD9 2030 aa14.23□□□□□ -0.13
CTNNA1-237ENST00000523275 MYH1P12882 1939 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 XRCC5P13010 732 aaKnown RBP14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 CYP2B6P20813 491 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 GABPAQ06546 454 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 C20orf194Q5TEA3 1177 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 POTEEQ6S8J3 1075 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 LCORLQ8N3X6 602 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 ACER1Q8TDN7 264 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 SDR42E1Q8WUS8 393 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 SOCS4Q8WXH5 440 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 PAGR1Q9BTK6 254 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 HMX1Q9NP08 348 aaPredicted RBP14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 DCP1AQ9NPI6 582 aaPredicted RBP14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 NR2E3Q9Y5X4 410 aa14.22□□□□□ -0.13
CTNNA1-237ENST00000523275 RPTORQ8N122 1335 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 GUCY1A2P33402 732 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 TRIM32Q13049 653 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 SEPT2Q15019 361 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 CATSPERGQ6ZRH7 1159 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 HAUS7Q99871 368 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 PORCNQ9H237 461 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 ARMT1Q9H993 441 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
CTNNA1-237ENST00000523275 MPHOSPH10O00566 681 aaKnown RBP14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 VCAM1P19320 739 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 ADD2P35612 726 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 EVX2Q03828 476 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 GPR142Q7Z601 462 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 PLEKHH3Q7Z736 793 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 TRMT44Q8IYL2 757 aaKnown RBP14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 TRIB2Q92519 343 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 USP6NLQ92738 828 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 ATP8A2Q9NTI2 1148 aa14.2□□□□□ -0.14
CTNNA1-237ENST00000523275 PRKAB2O43741 272 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 GLRX3O76003 335 aaKnown RBP14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 MBD4O95243 580 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 CYP2D6P10635 497 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 RGS2P41220 211 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 CCNA1P78396 465 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 SLFNL1Q499Z3 407 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 MORN1Q5T089 497 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 ANKLE1Q8NAG6 615 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 CWC22Q9HCG8 908 aaKnown RBP14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 SWAP70Q9UH65 585 aa14.19□□□□□ -0.14
CTNNA1-237ENST00000523275 SMARCA5O60264 1052 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 EVI5O60447 810 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 CNMDO75829 334 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 PRKAR2AP13861 404 aaKnown RBP14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 FXR1P51114 621 aaKnown RBP eCLIP14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 UBE3CQ15386 1083 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 MAP3K21Q5TCX8 1036 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 ZSCAN25Q6NSZ9 544 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 LBX2Q6XYB7 198 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 TMEM179Q6ZVK1 233 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 SLC44A5Q8NCS7 719 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 RPAP3Q9H6T3 665 aaPredicted RBP14.18□□□□□ -0.14
CTNNA1-237ENST00000523275 A0A1W2PRG0 241 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 ZKSCAN1P17029 563 aaPredicted RBP14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 MAP2K5Q13163 448 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 COG2Q14746 738 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 C12orf60Q5U649 245 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 AMOTL1Q8IY63 956 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 DIS3LQ8TF46 1054 aaKnown RBP14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 DDRGK1Q96HY6 314 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 ECHDC1Q9NTX5 307 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 HOXC10Q9NYD6 342 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 BTBD7Q9P203 1132 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 TRIOBPQ9H2D6 2365 aa14.17□□□□□ -0.14
CTNNA1-237ENST00000523275 SLC15A5A6NIM6 579 aa14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 USP17L12C9JPN9 530 aa14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 USP17L21D6R901 530 aa14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 CHGBP05060 677 aa14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 CACNB2Q08289 660 aaPredicted RBP14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 CCL14Q16627 93 aa14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 WDR78Q5VTH9 848 aa14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 CCDC17Q96LX7 622 aa14.16□□□□□ -0.14
CTNNA1-237ENST00000523275 APBA2Q99767 749 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms