RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CHMP4BQ9H444 224 aaKnown RBP18.38■□□□□ 0.53
CSMD1-207ENST00000520451 HMX1Q9NP08 348 aaPredicted RBP18.38■□□□□ 0.53
CSMD1-207ENST00000520451 MCM9Q9NXL9 1143 aa18.38■□□□□ 0.53
CSMD1-207ENST00000520451 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
CSMD1-207ENST00000520451 DDX60LQ5H9U9 1706 aaKnown RBP18.37■□□□□ 0.53
CSMD1-207ENST00000520451 TRIOBPQ9H2D6 2365 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 TCRBV5S4A2TA0A5A2 114 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 Q3C1V9 767 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 ACER1Q8TDN7 264 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 KIAA1683Q9H0B3 1180 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 PORCNQ9H237 461 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 CWC22Q9HCG8 908 aaKnown RBP18.37■□□□□ 0.53
CSMD1-207ENST00000520451 RPTORQ8N122 1335 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 RANBP2P49792 3224 aaKnown RBP18.37■□□□□ 0.53
CSMD1-207ENST00000520451 PLXNB2O15031 1838 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 NAV1Q8NEY1 1877 aa18.37■□□□□ 0.53
CSMD1-207ENST00000520451 VCAM1P19320 739 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 EVX2Q03828 476 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 GABPAQ06546 454 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 POTEEQ6S8J3 1075 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 GPR142Q7Z601 462 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 LCORLQ8N3X6 602 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 DIS3LQ8TF46 1054 aaKnown RBP18.36■□□□□ 0.53
CSMD1-207ENST00000520451 SDR42E1Q8WUS8 393 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 PAWRQ96IZ0 340 aaKnown RBP18.36■□□□□ 0.53
CSMD1-207ENST00000520451 PAG1Q9NWQ8 432 aa18.36■□□□□ 0.53
CSMD1-207ENST00000520451 MPHOSPH10O00566 681 aaKnown RBP18.35■□□□□ 0.53
CSMD1-207ENST00000520451 EVI5O60447 810 aa18.35■□□□□ 0.53
CSMD1-207ENST00000520451 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
CSMD1-207ENST00000520451 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
CSMD1-207ENST00000520451 ZKSCAN1P17029 563 aaPredicted RBP18.35■□□□□ 0.53
CSMD1-207ENST00000520451 GUCY1A2P33402 732 aa18.35■□□□□ 0.53
CSMD1-207ENST00000520451 CATSPERGQ6ZRH7 1159 aa18.35■□□□□ 0.53
CSMD1-207ENST00000520451 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
CSMD1-207ENST00000520451 PLEKHH3Q7Z736 793 aa18.35■□□□□ 0.53
CSMD1-207ENST00000520451 BOLA2Q9H3K6 86 aa18.35■□□□□ 0.53
CSMD1-207ENST00000520451 DCP1AQ9NPI6 582 aaPredicted RBP18.35■□□□□ 0.53
CSMD1-207ENST00000520451 RABGAP1Q9Y3P9 1069 aa18.35■□□□□ 0.53
CSMD1-207ENST00000520451 CNMDO75829 334 aa18.34■□□□□ 0.53
CSMD1-207ENST00000520451 CYP2D6P10635 497 aa18.34■□□□□ 0.53
CSMD1-207ENST00000520451 RGS2P41220 211 aa18.34■□□□□ 0.53
CSMD1-207ENST00000520451 SEPT2Q15019 361 aa18.34■□□□□ 0.53
CSMD1-207ENST00000520451 MORN1Q5T089 497 aa18.34■□□□□ 0.53
CSMD1-207ENST00000520451 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
CSMD1-207ENST00000520451 ANKLE1Q8NAG6 615 aa18.34■□□□□ 0.53
CSMD1-207ENST00000520451 ARMT1Q9H993 441 aa18.34■□□□□ 0.53
CSMD1-207ENST00000520451 RBM27Q9P2N5 1060 aaKnown RBP18.34■□□□□ 0.53
CSMD1-207ENST00000520451 MBD4O95243 580 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 ATP5JP18859 108 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 ADD2P35612 726 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 CCNA1P78396 465 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 SLFNL1Q499Z3 407 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 MAP3K21Q5TCX8 1036 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 C20orf194Q5TEA3 1177 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 WDR78Q5VTH9 848 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 USP6NLQ92738 828 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 APBA2Q99767 749 aa18.33■□□□□ 0.52
CSMD1-207ENST00000520451 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
CSMD1-207ENST00000520451 SLC44A5Q8NCS7 719 aa18.32■□□□□ 0.52
CSMD1-207ENST00000520451 HAUS7Q99871 368 aa18.32■□□□□ 0.52
CSMD1-207ENST00000520451 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.32■□□□□ 0.523e-7■■■■□ 22.2
CSMD1-207ENST00000520451 SPDYE16A6NNV3 312 aaPredicted RBP18.31■□□□□ 0.52
CSMD1-207ENST00000520451 PRKAB2O43741 272 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 GLRX3O76003 335 aaKnown RBP18.31■□□□□ 0.52
CSMD1-207ENST00000520451 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
CSMD1-207ENST00000520451 CCL14Q16627 93 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 LBX2Q6XYB7 198 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 DYNLL2Q96FJ2 89 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 LRRCC1Q9C099 1032 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 NBPF3Q9H094 633 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 ATP8A2Q9NTI2 1148 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 SWAP70Q9UH65 585 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
CSMD1-207ENST00000520451 A0A1W2PRG0 241 aa18.3■□□□□ 0.52
CSMD1-207ENST00000520451 MAP2K5Q13163 448 aa18.3■□□□□ 0.52
CSMD1-207ENST00000520451 TMEM179Q6ZVK1 233 aa18.3■□□□□ 0.52
CSMD1-207ENST00000520451 PRO3102Q9H379 93 aa18.3■□□□□ 0.52
CSMD1-207ENST00000520451 BTBD7Q9P203 1132 aa18.3■□□□□ 0.52
CSMD1-207ENST00000520451 SMARCA5O60264 1052 aaPredicted RBP18.29■□□□□ 0.52
CSMD1-207ENST00000520451 CHGBP05060 677 aa18.29■□□□□ 0.52
CSMD1-207ENST00000520451 MNX1P50219 401 aaPredicted RBP18.29■□□□□ 0.52
CSMD1-207ENST00000520451 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
CSMD1-207ENST00000520451 C11orf49Q9H6J7 331 aa18.29■□□□□ 0.52
CSMD1-207ENST00000520451 IVNS1ABPQ9Y6Y0 642 aa18.29■□□□□ 0.52
CSMD1-207ENST00000520451 SZT2Q5T011 3432 aa18.28■□□□□ 0.52
CSMD1-207ENST00000520451 SLC15A5A6NIM6 579 aa18.28■□□□□ 0.52
CSMD1-207ENST00000520451 AKR1B1P15121 316 aa18.28■□□□□ 0.52
CSMD1-207ENST00000520451 PTPREP23469 700 aa18.28■□□□□ 0.52
CSMD1-207ENST00000520451 CCND3P30281 292 aaPredicted RBP18.28■□□□□ 0.52
CSMD1-207ENST00000520451 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
CSMD1-207ENST00000520451 CLEC10AQ8IUN9 316 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms