RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 FUBP3Q96I24 572 aaKnown RBP eCLIP4.84□□□□□ -1.63
RNU4-60P-201ENST00000517239 OSMRQ99650 979 aa4.84□□□□□ -1.63
RNU4-60P-201ENST00000517239 IFT22Q9H7X7 185 aa4.84□□□□□ -1.63
RNU4-60P-201ENST00000517239 ARHGEF4Q9NR80 690 aa4.84□□□□□ -1.63
RNU4-60P-201ENST00000517239 PNMA8BQ9ULN7 279 aaPredicted RBP4.84□□□□□ -1.63
RNU4-60P-201ENST00000517239 NOL7Q9UMY1 257 aaKnown RBP4.84□□□□□ -1.63
RNU4-60P-201ENST00000517239 CTDP1Q9Y5B0 961 aaPredicted RBP4.84□□□□□ -1.63
RNU4-60P-201ENST00000517239 METTL12A8MUP2 240 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 TK2O00142 265 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 SNPHO15079 494 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 SASH3O75995 380 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 AGR2O95994 175 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 SETSIPP0DME0 302 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 VDRP11473 427 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 TATP17735 454 aaPredicted RBP4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 POU3F2P20265 443 aaPredicted RBP4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 TNFAIP3P21580 790 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 BMP6P22004 513 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 GRNP28799 593 aaKnown RBP4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 PTGIRP43119 386 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 PHKA2P46019 1235 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 GTF2H3Q13889 308 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 CCDC96Q2M329 555 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 GNPTABQ3T906 1256 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 CFAP100Q494V2 611 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 C4orf17Q53FE4 359 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 HYIQ5T013 277 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 JAKMIP3Q5VZ66 844 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 PPP4R3AQ6IN85 833 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 LVRNQ6Q4G3 990 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 EPM2AIP1Q7L775 607 aaPredicted RBP4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 MAATS1Q7Z4T9 603 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 KDF1Q8NAX2 398 aaPredicted RBP4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 ATXN2LQ8WWM7 1075 aaKnown RBP4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 WNT2BQ93097 391 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 MYD88Q99836 296 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZKSCAN3Q9BRR0 538 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 MUC3BQ9H195 1237 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC12A5Q9H2X9 1139 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 ANLNQ9NQW6 1124 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 TMEM39AQ9NV64 488 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 CLIC5Q9NZA1 410 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 LRP2BPQ9P2M1 347 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 NDOR1Q9UHB4 597 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 DACH1Q9UI36 760 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 SAMM50Q9Y512 469 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 DGKBQ9Y6T7 804 aa4.83□□□□□ -1.64
RNU4-60P-201ENST00000517239 POTEMA6NI47 508 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 PRODHO43272 600 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 FIBPO43427 364 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZEB2O60315 1214 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 HIP1RO75146 1068 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 PRKD3O94806 890 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZRANB2O95218 330 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 MT-CO1P00395 513 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 JMJD7P0C870 316 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 ACPPP15309 386 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 LPOP22079 712 aaPredicted RBP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 SCNN1BP51168 640 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 GTF2A2P52657 109 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 AK2P54819 239 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 GPSM2P81274 684 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 RBM10P98175 930 aaKnown RBP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC7A5Q01650 507 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 FAAP100Q0VG06 881 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 TRIM32Q13049 653 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 DDX10Q13206 875 aaKnown RBP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 NR5A1Q13285 461 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 GALEQ14376 348 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZNF460Q14592 562 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC9A5Q14940 896 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 PCBP2Q15366 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 GPR158Q5T848 1215 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 IQSEC1Q6DN90 963 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 XRRA1Q6P2D8 792 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 POTEGQ6S5H5 508 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 FCHSD1Q86WN1 690 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 NCAPG2Q86XI2 1143 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 TTC30BQ8N4P2 665 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 CPA6Q8N4T0 437 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 OR2W6PQ8NHA6 318 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 SLC7A14Q8TBB6 771 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 SP7Q8TDD2 431 aaPredicted RBP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 POF1BQ8WVV4 589 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 TMEM40Q8WWA1 233 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 ZNF516Q92618 1163 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 AGBL1Q96MI9 1066 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 AARSD1Q9BTE6 412 aaKnown RBP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 PHAXQ9H814 394 aaKnown RBP4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 IFT122Q9HBG6 1241 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 CBX8Q9HC52 389 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 AAASQ9NRG9 546 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 KLHL11Q9NVR0 708 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 ASAP1Q9ULH1 1129 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 CYP8B1Q9UNU6 501 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 GIT1Q9Y2X7 761 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 PCDHGB3Q9Y5G1 929 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 TLL2Q9Y6L7 1015 aa4.82□□□□□ -1.64
RNU4-60P-201ENST00000517239 A0A096LPE4 126 aa4.81□□□□□ -1.64
RNU4-60P-201ENST00000517239 ABHD14A-ACY1A0A1B0GW23 586 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms