RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 SEPT2Q15019 361 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZYXQ15942 572 aaKnown RBP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 C8orf34Q49A92 452 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TMEM67Q5HYA8 995 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 IFIT1BQ5T764 474 aaKnown RBP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 USP17L2Q6R6M4 530 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CATIPQ7Z7H3 387 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TBC1D10CQ8IV04 446 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZNF280CQ8ND82 737 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 WNK4Q96J92 1243 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CLMNQ96JQ2 1002 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TMEM87BQ96K49 555 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CAPNS2Q96L46 248 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 TTC14Q96N46 770 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 ZSCAN10Q96SZ4 725 aaPredicted RBP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 BACH2Q9BYV9 841 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 IL25Q9H293 177 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 INCENPQ9NQS7 918 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 MTMR7Q9Y216 660 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 SNCAIPQ9Y6H5 919 aa6.4□□□□□ -1.38
SCARNA16.4-201ENST00000516956 CCL15-CCL14A0A0B4J2E2 113 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RASSF10A6NK89 507 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FOXP2O15409 715 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ST18O60284 1047 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLURP2P0DP57 97 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TOP1P11387 765 aaKnown RBP6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 EEF2P13639 858 aaKnown RBP6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 OSBPP22059 807 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ANKRD1Q15327 319 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CCL15Q16663 113 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CCDC96Q2M329 555 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TSGA10IPQ3SY00 556 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SPRYD7Q5W111 196 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CYP4F22Q6NT55 531 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SAMD1Q6SPF0 538 aaPredicted RBP6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DHX32Q7L7V1 743 aaKnown RBP6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DGKHQ86XP1 1220 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CHMP4CQ96CF2 233 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZKSCAN3Q9BRR0 538 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 WDR18Q9BV38 432 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DNAJC18Q9H819 358 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PDRG1Q9NUG6 133 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TCP11L1Q9NUJ3 509 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MTMR4Q9NYA4 1195 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZSWIM5Q9P217 1185 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NYAP2Q9P242 653 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PNMA3Q9UL41 463 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SNX14Q9Y5W7 946 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TNKSO95271 1327 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NEDD4P46934 1319 aa6.39□□□□□ -1.39
SCARNA16.4-201ENST00000516956 POLR2AP24928 1970 aaKnown RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DHX16O60231 1041 aaKnown RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SEC24BO95487 1268 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ALDH1A1P00352 501 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLC10A3P09131 477 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FGRP09769 529 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CALM1P0DP23 149 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CALM2P0DP24 149 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CALM3P0DP25 149 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KIF5BP33176 963 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MAP2K2P36507 400 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLC1A4P43007 532 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NEK4P51957 841 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 HMGCS2P54868 508 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 BACE1P56817 501 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 IRX3P78415 501 aaPredicted RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KIF23Q02241 960 aaPredicted RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 EVX2Q03828 476 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MTMR2Q13614 643 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLFN13Q68D06 897 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CPLX2Q6PUV4 134 aaKnown RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CHST3Q7LGC8 479 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CCDC84Q86UT8 332 aaPredicted RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RASAL3Q86YV0 1011 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CCAR1Q8IX12 1150 aaKnown RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 IL27Q8NEV9 243 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CTCFLQ8NI51 663 aaPredicted RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LPAR1Q92633 364 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CEP95Q96GE4 821 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MTA3Q9BTC8 594 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TM6SF1Q9BZW5 370 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TANGO6Q9C0B7 1094 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KIAA1683Q9H0B3 1180 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SYNPO2Q9UMS6 1093 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TMX2Q9Y320 296 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLC12A7Q9Y666 1083 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 WDR33Q9C0J8 1336 aaKnown RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SSC5DA1L4H1 1573 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FOCADQ5VW36 1801 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TRPM7Q96QT4 1865 aa6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 BAZ2AQ9UIF9 1905 aaKnown RBP6.38□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LAMB1P07942 1786 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 WDR19Q8NEZ3 1342 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CCDC196A0A1B0GTZ2 297 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L15C9J2P7 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L13C9JLJ4 530 aa6.37□□□□□ -1.39
SCARNA16.4-201ENST00000516956 USP17L11C9JVI0 530 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms