RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 HMX1Q9NP08 348 aaPredicted RBP29.2■■■□□ 2.26
CCND3-221ENST00000514588 RBM27Q9P2N5 1060 aaKnown RBP29.2■■■□□ 2.26
CCND3-221ENST00000514588 ZNF532Q9HCE3 1301 aa29.2■■■□□ 2.26
CCND3-221ENST00000514588 XRCC5P13010 732 aaKnown RBP29.19■■■□□ 2.26
CCND3-221ENST00000514588 ACER1Q8TDN7 264 aa29.19■■■□□ 2.26
CCND3-221ENST00000514588 DIS3LQ8TF46 1054 aaKnown RBP29.19■■■□□ 2.26
CCND3-221ENST00000514588 TCRBV5S4A2TA0A5A2 114 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L15C9J2P7 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L13C9JLJ4 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L11C9JVI0 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L18D6R9N7 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L22D6RA61 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L17D6RBQ6 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L19D6RCP7 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L20D6RJB6 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 POLR3DP05423 398 aaPredicted RBP29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP14P54578 494 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 GABPAQ06546 454 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP17L24Q0WX57 530 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 MAP3K21Q5TCX8 1036 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 USP6NLQ92738 828 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 BCL11AQ9H165 835 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 CABP5Q9NP86 173 aa29.18■■■□□ 2.26
CCND3-221ENST00000514588 EVI5O60447 810 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 RAB11FIP3O75154 756 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 GUCY1A2P33402 732 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 EVX2Q03828 476 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 PDE3AQ14432 1141 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 GPR142Q7Z601 462 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 ANKLE1Q8NAG6 615 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 EDC3Q96F86 508 aaKnown RBP29.17■■■□□ 2.26
CCND3-221ENST00000514588 PRO3102Q9H379 93 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 MCM9Q9NXL9 1143 aa29.17■■■□□ 2.26
CCND3-221ENST00000514588 VCAM1P19320 739 aa29.16■■■□□ 2.26
CCND3-221ENST00000514588 CATSPERGQ6ZRH7 1159 aa29.16■■■□□ 2.26
CCND3-221ENST00000514588 NECAB2Q7Z6G3 386 aa29.16■■■□□ 2.26
CCND3-221ENST00000514588 PLEKHH3Q7Z736 793 aa29.16■■■□□ 2.26
CCND3-221ENST00000514588 CCAR1Q8IX12 1150 aaKnown RBP29.16■■■□□ 2.26
CCND3-221ENST00000514588 LCORLQ8N3X6 602 aa29.16■■■□□ 2.26
CCND3-221ENST00000514588 RABGAP1Q9Y3P9 1069 aa29.16■■■□□ 2.26
CCND3-221ENST00000514588 NAV1Q8NEY1 1877 aa29.15■■■□□ 2.26
CCND3-221ENST00000514588 CNMDO75829 334 aa29.15■■■□□ 2.26
CCND3-221ENST00000514588 PRKAR2AP13861 404 aaKnown RBP29.15■■■□□ 2.26
CCND3-221ENST00000514588 MORN1Q5T089 497 aa29.15■■■□□ 2.26
CCND3-221ENST00000514588 RANBP2P49792 3224 aaKnown RBP29.15■■■□□ 2.26
CCND3-221ENST00000514588 MNX1P50219 401 aaPredicted RBP29.14■■■□□ 2.26
CCND3-221ENST00000514588 TRMT44Q8IYL2 757 aaKnown RBP29.14■■■□□ 2.26
CCND3-221ENST00000514588 SDR42E1Q8WUS8 393 aa29.14■■■□□ 2.26
CCND3-221ENST00000514588 ZKSCAN1P17029 563 aaPredicted RBP29.13■■■□□ 2.25
CCND3-221ENST00000514588 RGS2P41220 211 aa29.13■■■□□ 2.25
CCND3-221ENST00000514588 SEPT2Q15019 361 aa29.13■■■□□ 2.25
CCND3-221ENST00000514588 DCP1AQ9NPI6 582 aaPredicted RBP29.13■■■□□ 2.25
CCND3-221ENST00000514588 PAG1Q9NWQ8 432 aa29.13■■■□□ 2.25
CCND3-221ENST00000514588 CCL14Q16627 93 aa29.12■■■□□ 2.25
CCND3-221ENST00000514588 BOLA2Q9H3K6 86 aa29.12■■■□□ 2.25
CCND3-221ENST00000514588 CHMP4BQ9H444 224 aaKnown RBP29.12■■■□□ 2.25
CCND3-221ENST00000514588 ARMT1Q9H993 441 aa29.12■■■□□ 2.25
CCND3-221ENST00000514588 RCAN3Q9UKA8 241 aa29.12■■■□□ 2.25
CCND3-221ENST00000514588 OGDHLQ9ULD0 1010 aa29.12■■■□□ 2.25
CCND3-221ENST00000514588 CYP2D6P10635 497 aa29.11■■■□□ 2.25
CCND3-221ENST00000514588 ATP5JP18859 108 aa29.11■■■□□ 2.25
CCND3-221ENST00000514588 CACNB2Q08289 660 aaPredicted RBP29.11■■■□□ 2.25
CCND3-221ENST00000514588 SLFNL1Q499Z3 407 aa29.11■■■□□ 2.25
CCND3-221ENST00000514588 LBX2Q6XYB7 198 aa29.11■■■□□ 2.25
CCND3-221ENST00000514588 APBA2Q99767 749 aa29.11■■■□□ 2.25
CCND3-221ENST00000514588 RPAP3Q9H6T3 665 aaPredicted RBP29.11■■■□□ 2.25
CCND3-221ENST00000514588 ALPK3Q96L96 1907 aa29.1■■■□□ 2.25
CCND3-221ENST00000514588 CCNA1P78396 465 aa29.1■■■□□ 2.25
CCND3-221ENST00000514588 NBPF3Q9H094 633 aa29.1■■■□□ 2.25
CCND3-221ENST00000514588 CWC22Q9HCG8 908 aaKnown RBP29.1■■■□□ 2.25
CCND3-221ENST00000514588 BTBD7Q9P203 1132 aa29.1■■■□□ 2.25
CCND3-221ENST00000514588 A0A1W2PRG0 241 aa29.09■■■□□ 2.25
CCND3-221ENST00000514588 MPHOSPH10O00566 681 aaKnown RBP29.09■■■□□ 2.25
CCND3-221ENST00000514588 ADD2P35612 726 aa29.09■■■□□ 2.25
CCND3-221ENST00000514588 MAP2K5Q13163 448 aa29.09■■■□□ 2.25
CCND3-221ENST00000514588 SLC44A5Q8NCS7 719 aa29.09■■■□□ 2.25
CCND3-221ENST00000514588 SPDYE16A6NNV3 312 aaPredicted RBP29.08■■■□□ 2.25
CCND3-221ENST00000514588 PRKAB2O43741 272 aa29.08■■■□□ 2.25
CCND3-221ENST00000514588 HAUS7Q99871 368 aa29.08■■■□□ 2.25
CCND3-221ENST00000514588 GLRX3O76003 335 aaKnown RBP29.07■■■□□ 2.24
CCND3-221ENST00000514588 MBD4O95243 580 aa29.07■■■□□ 2.24
CCND3-221ENST00000514588 CCND3P30281 292 aaPredicted RBP29.07■■■□□ 2.24
CCND3-221ENST00000514588 DYNLL2Q96FJ2 89 aa29.07■■■□□ 2.24
CCND3-221ENST00000514588 C11orf49Q9H6J7 331 aa29.07■■■□□ 2.24
CCND3-221ENST00000514588 SLC15A5A6NIM6 579 aa29.06■■■□□ 2.24
CCND3-221ENST00000514588 PTPREP23469 700 aa29.06■■■□□ 2.24
CCND3-221ENST00000514588 C20orf194Q5TEA3 1177 aa29.06■■■□□ 2.24
CCND3-221ENST00000514588 WDR78Q5VTH9 848 aa29.06■■■□□ 2.24
CCND3-221ENST00000514588 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.06■■■□□ 2.24
CCND3-221ENST00000514588 ATP8A2Q9NTI2 1148 aa29.06■■■□□ 2.24
CCND3-221ENST00000514588 SWAP70Q9UH65 585 aa29.06■■■□□ 2.24
CCND3-221ENST00000514588 CHGBP05060 677 aa29.05■■■□□ 2.24
CCND3-221ENST00000514588 TMEM179Q6ZVK1 233 aa29.05■■■□□ 2.24
CCND3-221ENST00000514588 C7orf61Q8IZ16 206 aa29.05■■■□□ 2.24
CCND3-221ENST00000514588 STAP2Q9UGK3 403 aa29.05■■■□□ 2.24
CCND3-221ENST00000514588 LHX8Q68G74 356 aa29.04■■■□□ 2.24
CCND3-221ENST00000514588 FLRT1Q9NZU1 646 aa29.04■■■□□ 2.24
CCND3-221ENST00000514588 A0A1W2PPC1 479 aa29.03■■■□□ 2.24
CCND3-221ENST00000514588 COG2Q14746 738 aa29.03■■■□□ 2.24
CCND3-221ENST00000514588 KIAA1755Q5JYT7 1200 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms